Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vti1aO89116 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vti1aO89116 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vti1aO89116 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1aO89116 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Vti1aO89116 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Vti1aO89116 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Vti1aO89116 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.98■□□□□ 0.63
Vti1aO89116 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.98■□□□□ 0.63
Vti1aO89116 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1aO89116 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1aO89116 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1aO89116 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Vti1aO89116 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Vti1aO89116 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1aO89116 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1aO89116 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Vti1aO89116 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Vti1aO89116 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vti1aO89116 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vti1aO89116 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.97■□□□□ 0.63
Vti1aO89116 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vti1aO89116 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.97■□□□□ 0.63
Vti1aO89116 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vti1aO89116 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vti1aO89116 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Vti1aO89116 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vti1aO89116 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vti1aO89116 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vti1aO89116 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vti1aO89116 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vti1aO89116 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vti1aO89116 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.96■□□□□ 0.63
Vti1aO89116 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vti1aO89116 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vti1aO89116 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.96■□□□□ 0.63
Vti1aO89116 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vti1aO89116 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.96■□□□□ 0.63
Vti1aO89116 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vti1aO89116 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vti1aO89116 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vti1aO89116 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vti1aO89116 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.96■□□□□ 0.63
Vti1aO89116 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vti1aO89116 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.95■□□□□ 0.62
Vti1aO89116 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vti1aO89116 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vti1aO89116 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vti1aO89116 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Vti1aO89116 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.95■□□□□ 0.62
Vti1aO89116 Gm11539-201ENSMUST00000119837 557 ntBASIC18.95■□□□□ 0.62
Vti1aO89116 Gm13436-201ENSMUST00000120418 567 ntBASIC18.95■□□□□ 0.62
Vti1aO89116 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vti1aO89116 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.95■□□□□ 0.62
Vti1aO89116 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vti1aO89116 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vti1aO89116 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Vti1aO89116 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vti1aO89116 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vti1aO89116 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vti1aO89116 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vti1aO89116 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vti1aO89116 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vti1aO89116 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vti1aO89116 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Vti1aO89116 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vti1aO89116 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vti1aO89116 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vti1aO89116 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.94■□□□□ 0.62
Vti1aO89116 Gm13559-201ENSMUST00000120476 863 ntBASIC18.94■□□□□ 0.62
Vti1aO89116 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.94■□□□□ 0.62
Vti1aO89116 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.94■□□□□ 0.62
Vti1aO89116 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vti1aO89116 Odf3b-204ENSMUST00000227834 930 ntBASIC18.94■□□□□ 0.62
Vti1aO89116 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vti1aO89116 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vti1aO89116 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vti1aO89116 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.94■□□□□ 0.62
Vti1aO89116 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vti1aO89116 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vti1aO89116 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vti1aO89116 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vti1aO89116 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Vti1aO89116 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.93■□□□□ 0.62
Vti1aO89116 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Vti1aO89116 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vti1aO89116 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Vti1aO89116 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.93■□□□□ 0.62
Vti1aO89116 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vti1aO89116 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vti1aO89116 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vti1aO89116 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Vti1aO89116 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vti1aO89116 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Vti1aO89116 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vti1aO89116 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vti1aO89116 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vti1aO89116 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vti1aO89116 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Vti1aO89116 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms