Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp1O89090 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.8■□□□□ 0.44
Sp1O89090 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sp1O89090 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Sp1O89090 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.8■□□□□ 0.44
Sp1O89090 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sp1O89090 Gm10231-201ENSMUST00000181584 441 ntBASIC17.8■□□□□ 0.44
Sp1O89090 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Sp1O89090 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp1O89090 Gm10175-202ENSMUST00000208752 441 ntBASIC17.8■□□□□ 0.44
Sp1O89090 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp1O89090 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp1O89090 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp1O89090 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp1O89090 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp1O89090 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.8■□□□□ 0.44
Sp1O89090 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp1O89090 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp1O89090 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.79■□□□□ 0.44
Sp1O89090 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sp1O89090 Gm7638-201ENSMUST00000121348 967 ntBASIC17.79■□□□□ 0.44
Sp1O89090 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.79■□□□□ 0.44
Sp1O89090 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.79■□□□□ 0.44
Sp1O89090 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.79■□□□□ 0.44
Sp1O89090 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sp1O89090 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sp1O89090 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Sp1O89090 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sp1O89090 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sp1O89090 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.78■□□□□ 0.44
Sp1O89090 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sp1O89090 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sp1O89090 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sp1O89090 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sp1O89090 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sp1O89090 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.78■□□□□ 0.44
Sp1O89090 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sp1O89090 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sp1O89090 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.78■□□□□ 0.44
Sp1O89090 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.78■□□□□ 0.44
Sp1O89090 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sp1O89090 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sp1O89090 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.78■□□□□ 0.44
Sp1O89090 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.78■□□□□ 0.44
Sp1O89090 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sp1O89090 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Sp1O89090 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sp1O89090 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Sp1O89090 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.78■□□□□ 0.44
Sp1O89090 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sp1O89090 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sp1O89090 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sp1O89090 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Sp1O89090 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.77■□□□□ 0.44
Sp1O89090 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sp1O89090 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sp1O89090 Gm7977-201ENSMUST00000193787 748 ntBASIC17.77■□□□□ 0.44
Sp1O89090 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.77■□□□□ 0.44
Sp1O89090 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sp1O89090 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.77■□□□□ 0.44
Sp1O89090 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Sp1O89090 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sp1O89090 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Sp1O89090 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sp1O89090 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sp1O89090 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sp1O89090 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sp1O89090 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.76■□□□□ 0.43
Sp1O89090 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sp1O89090 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.76■□□□□ 0.43
Sp1O89090 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sp1O89090 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sp1O89090 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sp1O89090 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sp1O89090 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Sp1O89090 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sp1O89090 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Sp1O89090 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sp1O89090 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sp1O89090 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.75■□□□□ 0.43
Sp1O89090 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sp1O89090 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sp1O89090 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sp1O89090 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sp1O89090 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sp1O89090 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Sp1O89090 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sp1O89090 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sp1O89090 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sp1O89090 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp1O89090 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp1O89090 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp1O89090 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp1O89090 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sp1O89090 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sp1O89090 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sp1O89090 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp1O89090 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.74■□□□□ 0.43
Sp1O89090 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.74■□□□□ 0.43
Sp1O89090 Gm7791-201ENSMUST00000219066 539 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms