Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.5■□□□□ 0.39
Ldb2O55203 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ldb2O55203 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ldb2O55203 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ldb2O55203 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ldb2O55203 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ldb2O55203 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Ldb2O55203 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ldb2O55203 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.5■□□□□ 0.39
Ldb2O55203 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ldb2O55203 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Ldb2O55203 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ldb2O55203 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ldb2O55203 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ldb2O55203 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ldb2O55203 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ldb2O55203 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ldb2O55203 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ldb2O55203 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ldb2O55203 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ldb2O55203 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ldb2O55203 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ldb2O55203 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ldb2O55203 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.49■□□□□ 0.39
Ldb2O55203 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ldb2O55203 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ldb2O55203 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ldb2O55203 Gm10698-201ENSMUST00000182663 604 ntBASIC17.49■□□□□ 0.39
Ldb2O55203 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Ldb2O55203 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.49■□□□□ 0.39
Ldb2O55203 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.49■□□□□ 0.39
Ldb2O55203 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ldb2O55203 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ldb2O55203 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ldb2O55203 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.49■□□□□ 0.39
Ldb2O55203 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ldb2O55203 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ldb2O55203 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ldb2O55203 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Ldb2O55203 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ldb2O55203 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ldb2O55203 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ldb2O55203 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.48■□□□□ 0.39
Ldb2O55203 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ldb2O55203 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ldb2O55203 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ldb2O55203 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ldb2O55203 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Ldb2O55203 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ldb2O55203 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ldb2O55203 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb2O55203 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb2O55203 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb2O55203 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb2O55203 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb2O55203 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ldb2O55203 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb2O55203 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb2O55203 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb2O55203 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb2O55203 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb2O55203 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb2O55203 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb2O55203 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.47■□□□□ 0.39
Ldb2O55203 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb2O55203 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb2O55203 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb2O55203 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ldb2O55203 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb2O55203 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb2O55203 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb2O55203 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb2O55203 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb2O55203 Gm43183-201ENSMUST00000200632 547 ntBASIC17.46■□□□□ 0.39
Ldb2O55203 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb2O55203 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb2O55203 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Ldb2O55203 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb2O55203 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb2O55203 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ldb2O55203 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb2O55203 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb2O55203 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.45■□□□□ 0.38
Ldb2O55203 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb2O55203 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ldb2O55203 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb2O55203 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.45■□□□□ 0.38
Ldb2O55203 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ldb2O55203 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ldb2O55203 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb2O55203 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.45■□□□□ 0.38
Ldb2O55203 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb2O55203 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb2O55203 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb2O55203 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb2O55203 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.44■□□□□ 0.38
Ldb2O55203 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb2O55203 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb2O55203 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb2O55203 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms