Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.35■□□□□ 0.53
Per2O54943 Gm12896-201ENSMUST00000118430 226 ntBASIC18.35■□□□□ 0.53
Per2O54943 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Per2O54943 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
Per2O54943 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.35■□□□□ 0.53
Per2O54943 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per2O54943 Mtag2-201ENSMUST00000058665 714 ntBASIC18.35■□□□□ 0.53
Per2O54943 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per2O54943 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per2O54943 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per2O54943 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Per2O54943 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Per2O54943 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.35■□□□□ 0.53
Per2O54943 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per2O54943 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Per2O54943 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per2O54943 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per2O54943 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per2O54943 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Per2O54943 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Per2O54943 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Per2O54943 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Per2O54943 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.34■□□□□ 0.53
Per2O54943 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Per2O54943 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Per2O54943 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Per2O54943 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Per2O54943 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Per2O54943 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Per2O54943 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Per2O54943 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Per2O54943 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Per2O54943 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Per2O54943 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Per2O54943 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Per2O54943 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Per2O54943 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Per2O54943 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.33■□□□□ 0.53
Per2O54943 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Per2O54943 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Per2O54943 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.33■□□□□ 0.52
Per2O54943 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Per2O54943 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Per2O54943 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Per2O54943 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Per2O54943 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.33■□□□□ 0.52
Per2O54943 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Per2O54943 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Per2O54943 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Per2O54943 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Per2O54943 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Per2O54943 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.32■□□□□ 0.52
Per2O54943 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Per2O54943 Gm10138-203ENSMUST00000206952 366 ntBASIC18.32■□□□□ 0.52
Per2O54943 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Per2O54943 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Per2O54943 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Per2O54943 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per2O54943 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Per2O54943 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per2O54943 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per2O54943 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.31■□□□□ 0.52
Per2O54943 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
Per2O54943 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per2O54943 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Per2O54943 Mir6349-201ENSMUST00000184059 97 ntBASIC18.31■□□□□ 0.52
Per2O54943 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.31■□□□□ 0.52
Per2O54943 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.31■□□□□ 0.52
Per2O54943 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per2O54943 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per2O54943 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per2O54943 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per2O54943 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.31■□□□□ 0.52
Per2O54943 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.31■□□□□ 0.52
Per2O54943 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Per2O54943 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Per2O54943 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Per2O54943 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Per2O54943 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per2O54943 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.29■□□□□ 0.52
Per2O54943 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per2O54943 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms