Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn5O54942 Mir8112-201ENSMUST00000184382 131 ntBASIC18.28■□□□□ 0.52
Cldn5O54942 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.28■□□□□ 0.52
Cldn5O54942 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn5O54942 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn5O54942 Gm9987-201ENSMUST00000069768 567 ntBASIC18.28■□□□□ 0.52
Cldn5O54942 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
Cldn5O54942 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn5O54942 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn5O54942 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn5O54942 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Cldn5O54942 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn5O54942 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cldn5O54942 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn5O54942 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn5O54942 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn5O54942 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn5O54942 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn5O54942 Gm38027-201ENSMUST00000192315 235 ntBASIC18.27■□□□□ 0.52
Cldn5O54942 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn5O54942 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn5O54942 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn5O54942 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn5O54942 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Cldn5O54942 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cldn5O54942 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cldn5O54942 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cldn5O54942 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cldn5O54942 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cldn5O54942 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cldn5O54942 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn5O54942 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn5O54942 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn5O54942 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn5O54942 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn5O54942 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Cldn5O54942 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn5O54942 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn5O54942 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn5O54942 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.26■□□□□ 0.51
Cldn5O54942 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn5O54942 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.26■□□□□ 0.51
Cldn5O54942 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn5O54942 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.26■□□□□ 0.51
Cldn5O54942 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cldn5O54942 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn5O54942 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.25■□□□□ 0.51
Cldn5O54942 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn5O54942 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn5O54942 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn5O54942 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn5O54942 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn5O54942 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn5O54942 Gm13559-201ENSMUST00000120476 863 ntBASIC18.25■□□□□ 0.51
Cldn5O54942 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn5O54942 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.25■□□□□ 0.51
Cldn5O54942 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn5O54942 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn5O54942 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cldn5O54942 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn5O54942 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.25■□□□□ 0.51
Cldn5O54942 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Cldn5O54942 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn5O54942 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn5O54942 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn5O54942 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn5O54942 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn5O54942 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.24■□□□□ 0.51
Cldn5O54942 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn5O54942 Gm13836-201ENSMUST00000121159 501 ntBASIC18.24■□□□□ 0.51
Cldn5O54942 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.24■□□□□ 0.51
Cldn5O54942 Gm24841-201ENSMUST00000158676 357 ntBASIC18.24■□□□□ 0.51
Cldn5O54942 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn5O54942 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn5O54942 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cldn5O54942 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn5O54942 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn5O54942 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn5O54942 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Cldn5O54942 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn5O54942 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn5O54942 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Cldn5O54942 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn5O54942 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cldn5O54942 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn5O54942 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn5O54942 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn5O54942 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn5O54942 Gm6433-201ENSMUST00000118634 875 ntBASIC18.23■□□□□ 0.51
Cldn5O54942 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn5O54942 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cldn5O54942 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.23■□□□□ 0.51
Cldn5O54942 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn5O54942 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn5O54942 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cldn5O54942 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn5O54942 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cldn5O54942 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn5O54942 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn5O54942 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms