Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb3O54890 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb3O54890 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.66■□□□□ 0.58
Itgb3O54890 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Itgb3O54890 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.66■□□□□ 0.58
Itgb3O54890 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Itgb3O54890 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb3O54890 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb3O54890 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb3O54890 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb3O54890 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb3O54890 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb3O54890 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb3O54890 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb3O54890 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb3O54890 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb3O54890 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb3O54890 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb3O54890 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Itgb3O54890 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.65■□□□□ 0.58
Itgb3O54890 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb3O54890 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.65■□□□□ 0.58
Itgb3O54890 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb3O54890 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb3O54890 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb3O54890 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb3O54890 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb3O54890 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Itgb3O54890 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Itgb3O54890 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.64■□□□□ 0.57
Itgb3O54890 Gm30025-201ENSMUST00000218555 728 ntBASIC18.64■□□□□ 0.57
Itgb3O54890 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Itgb3O54890 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
Itgb3O54890 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Itgb3O54890 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Itgb3O54890 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Itgb3O54890 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Itgb3O54890 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Itgb3O54890 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Itgb3O54890 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.63■□□□□ 0.57
Itgb3O54890 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Itgb3O54890 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Itgb3O54890 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.63■□□□□ 0.57
Itgb3O54890 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.63■□□□□ 0.57
Itgb3O54890 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Itgb3O54890 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Itgb3O54890 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.63■□□□□ 0.57
Itgb3O54890 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Itgb3O54890 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Itgb3O54890 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Itgb3O54890 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Itgb3O54890 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Itgb3O54890 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Itgb3O54890 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Itgb3O54890 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
Itgb3O54890 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Itgb3O54890 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Itgb3O54890 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.63■□□□□ 0.57
Itgb3O54890 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Itgb3O54890 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.63■□□□□ 0.57
Itgb3O54890 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Itgb3O54890 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Itgb3O54890 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.62■□□□□ 0.57
Itgb3O54890 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Itgb3O54890 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Itgb3O54890 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Itgb3O54890 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.62■□□□□ 0.57
Itgb3O54890 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Itgb3O54890 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Itgb3O54890 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Itgb3O54890 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Itgb3O54890 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Itgb3O54890 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Itgb3O54890 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Itgb3O54890 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Itgb3O54890 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Itgb3O54890 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Itgb3O54890 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Itgb3O54890 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.61■□□□□ 0.57
Itgb3O54890 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Itgb3O54890 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Itgb3O54890 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Itgb3O54890 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Itgb3O54890 Gm38027-201ENSMUST00000192315 235 ntBASIC18.61■□□□□ 0.57
Itgb3O54890 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Itgb3O54890 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Itgb3O54890 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Itgb3O54890 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Itgb3O54890 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Itgb3O54890 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Itgb3O54890 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Itgb3O54890 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Itgb3O54890 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Itgb3O54890 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.6■□□□□ 0.57
Itgb3O54890 Gm43799-201ENSMUST00000201845 579 ntBASIC18.6■□□□□ 0.57
Itgb3O54890 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.6■□□□□ 0.57
Itgb3O54890 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.6■□□□□ 0.57
Itgb3O54890 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.6■□□□□ 0.57
Itgb3O54890 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Itgb3O54890 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms