Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccr6O54689 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccr6O54689 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ccr6O54689 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccr6O54689 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccr6O54689 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ccr6O54689 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccr6O54689 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccr6O54689 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccr6O54689 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.79□□□□□ -0.04
Ccr6O54689 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccr6O54689 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccr6O54689 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccr6O54689 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ccr6O54689 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccr6O54689 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccr6O54689 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Ccr6O54689 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccr6O54689 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccr6O54689 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.78□□□□□ -0.04
Ccr6O54689 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccr6O54689 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccr6O54689 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccr6O54689 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccr6O54689 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ccr6O54689 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.78□□□□□ -0.04
Ccr6O54689 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccr6O54689 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ccr6O54689 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccr6O54689 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccr6O54689 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ccr6O54689 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccr6O54689 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.78□□□□□ -0.04
Ccr6O54689 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ccr6O54689 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccr6O54689 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccr6O54689 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccr6O54689 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccr6O54689 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccr6O54689 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccr6O54689 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Ccr6O54689 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ccr6O54689 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ccr6O54689 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccr6O54689 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccr6O54689 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccr6O54689 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccr6O54689 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ccr6O54689 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccr6O54689 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccr6O54689 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccr6O54689 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccr6O54689 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccr6O54689 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Ccr6O54689 Mir8112-201ENSMUST00000184382 131 ntBASIC14.77□□□□□ -0.05
Ccr6O54689 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.77□□□□□ -0.05
Ccr6O54689 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Ccr6O54689 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccr6O54689 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccr6O54689 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccr6O54689 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccr6O54689 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccr6O54689 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccr6O54689 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccr6O54689 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Ccr6O54689 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ccr6O54689 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.76□□□□□ -0.05
Ccr6O54689 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.76□□□□□ -0.05
Ccr6O54689 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccr6O54689 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ccr6O54689 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccr6O54689 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccr6O54689 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccr6O54689 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccr6O54689 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccr6O54689 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.76□□□□□ -0.05
Ccr6O54689 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccr6O54689 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ccr6O54689 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccr6O54689 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccr6O54689 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccr6O54689 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.75□□□□□ -0.05
Ccr6O54689 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccr6O54689 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccr6O54689 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccr6O54689 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Ccr6O54689 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccr6O54689 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccr6O54689 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccr6O54689 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccr6O54689 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccr6O54689 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccr6O54689 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccr6O54689 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccr6O54689 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccr6O54689 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccr6O54689 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccr6O54689 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.74□□□□□ -0.05
Ccr6O54689 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccr6O54689 Gm15546-201ENSMUST00000122095 826 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms