Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.12■□□□□ 0.49
Sdc4O35988 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc4O35988 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc4O35988 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Sdc4O35988 Gm13401-201ENSMUST00000117074 291 ntBASIC18.12■□□□□ 0.49
Sdc4O35988 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc4O35988 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.12■□□□□ 0.49
Sdc4O35988 Gm38027-201ENSMUST00000192315 235 ntBASIC18.12■□□□□ 0.49
Sdc4O35988 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc4O35988 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Sdc4O35988 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc4O35988 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc4O35988 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc4O35988 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc4O35988 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Sdc4O35988 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc4O35988 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc4O35988 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc4O35988 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc4O35988 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.11■□□□□ 0.49
Sdc4O35988 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc4O35988 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc4O35988 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc4O35988 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc4O35988 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Sdc4O35988 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc4O35988 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.11■□□□□ 0.49
Sdc4O35988 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Sdc4O35988 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.11■□□□□ 0.49
Sdc4O35988 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc4O35988 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc4O35988 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc4O35988 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc4O35988 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc4O35988 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc4O35988 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Sdc4O35988 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc4O35988 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.1■□□□□ 0.49
Sdc4O35988 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc4O35988 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc4O35988 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.1■□□□□ 0.49
Sdc4O35988 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc4O35988 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc4O35988 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc4O35988 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc4O35988 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc4O35988 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc4O35988 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc4O35988 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.1■□□□□ 0.49
Sdc4O35988 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.1■□□□□ 0.49
Sdc4O35988 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.1■□□□□ 0.49
Sdc4O35988 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Sdc4O35988 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc4O35988 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc4O35988 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc4O35988 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc4O35988 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc4O35988 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc4O35988 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.1■□□□□ 0.49
Sdc4O35988 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc4O35988 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc4O35988 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.09■□□□□ 0.49
Sdc4O35988 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc4O35988 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc4O35988 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc4O35988 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc4O35988 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc4O35988 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.09■□□□□ 0.49
Sdc4O35988 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc4O35988 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc4O35988 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc4O35988 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc4O35988 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc4O35988 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc4O35988 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc4O35988 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc4O35988 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc4O35988 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Sdc4O35988 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sdc4O35988 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sdc4O35988 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sdc4O35988 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sdc4O35988 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sdc4O35988 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.49
Sdc4O35988 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Sdc4O35988 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.08■□□□□ 0.48
Sdc4O35988 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sdc4O35988 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sdc4O35988 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sdc4O35988 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sdc4O35988 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Sdc4O35988 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Sdc4O35988 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.08■□□□□ 0.48
Sdc4O35988 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.08■□□□□ 0.48
Sdc4O35988 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sdc4O35988 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sdc4O35988 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sdc4O35988 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sdc4O35988 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sdc4O35988 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms