Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Phox2bO35690 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Phox2bO35690 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Phox2bO35690 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Phox2bO35690 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Phox2bO35690 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Phox2bO35690 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Phox2bO35690 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Phox2bO35690 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Phox2bO35690 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Phox2bO35690 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Phox2bO35690 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Phox2bO35690 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.59■□□□□ 0.41
Phox2bO35690 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Phox2bO35690 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.59■□□□□ 0.41
Phox2bO35690 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Phox2bO35690 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Phox2bO35690 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Phox2bO35690 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Phox2bO35690 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Phox2bO35690 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.59■□□□□ 0.41
Phox2bO35690 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.59■□□□□ 0.41
Phox2bO35690 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Phox2bO35690 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Phox2bO35690 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Phox2bO35690 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Phox2bO35690 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Phox2bO35690 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Phox2bO35690 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Phox2bO35690 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.58■□□□□ 0.4
Phox2bO35690 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.58■□□□□ 0.4
Phox2bO35690 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Phox2bO35690 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Phox2bO35690 Gm27357-201ENSMUST00000183754 135 ntBASIC17.58■□□□□ 0.4
Phox2bO35690 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Phox2bO35690 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Phox2bO35690 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Phox2bO35690 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Phox2bO35690 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Phox2bO35690 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Phox2bO35690 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Phox2bO35690 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Phox2bO35690 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Phox2bO35690 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Phox2bO35690 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Phox2bO35690 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Phox2bO35690 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Phox2bO35690 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Phox2bO35690 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Phox2bO35690 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.57■□□□□ 0.4
Phox2bO35690 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.57■□□□□ 0.4
Phox2bO35690 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Phox2bO35690 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Phox2bO35690 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.57■□□□□ 0.4
Phox2bO35690 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Phox2bO35690 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Phox2bO35690 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Phox2bO35690 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.57■□□□□ 0.4
Phox2bO35690 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Phox2bO35690 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Phox2bO35690 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.57■□□□□ 0.4
Phox2bO35690 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Phox2bO35690 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Phox2bO35690 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Phox2bO35690 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Phox2bO35690 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phox2bO35690 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.56■□□□□ 0.4
Phox2bO35690 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.56■□□□□ 0.4
Phox2bO35690 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phox2bO35690 Gm18206-201ENSMUST00000207027 926 ntBASIC17.56■□□□□ 0.4
Phox2bO35690 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.56■□□□□ 0.4
Phox2bO35690 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.56■□□□□ 0.4
Phox2bO35690 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phox2bO35690 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phox2bO35690 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phox2bO35690 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Phox2bO35690 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phox2bO35690 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phox2bO35690 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phox2bO35690 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phox2bO35690 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phox2bO35690 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Phox2bO35690 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phox2bO35690 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Phox2bO35690 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.55■□□□□ 0.4
Phox2bO35690 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.55■□□□□ 0.4
Phox2bO35690 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.55■□□□□ 0.4
Phox2bO35690 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phox2bO35690 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Phox2bO35690 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.55■□□□□ 0.4
Phox2bO35690 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Phox2bO35690 Gm38027-201ENSMUST00000192315 235 ntBASIC17.55■□□□□ 0.4
Phox2bO35690 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phox2bO35690 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phox2bO35690 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phox2bO35690 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phox2bO35690 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phox2bO35690 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phox2bO35690 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.54■□□□□ 0.4
Phox2bO35690 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms