Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abca4O35600 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abca4O35600 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.57■□□□□ 0.24
Abca4O35600 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.57■□□□□ 0.24
Abca4O35600 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.57■□□□□ 0.24
Abca4O35600 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.57■□□□□ 0.24
Abca4O35600 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abca4O35600 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Abca4O35600 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.56■□□□□ 0.24
Abca4O35600 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.56■□□□□ 0.24
Abca4O35600 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.56■□□□□ 0.24
Abca4O35600 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abca4O35600 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abca4O35600 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Abca4O35600 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abca4O35600 Gm24841-201ENSMUST00000158676 357 ntBASIC16.56■□□□□ 0.24
Abca4O35600 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Abca4O35600 Gm9731-201ENSMUST00000209480 747 ntBASIC16.56■□□□□ 0.24
Abca4O35600 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abca4O35600 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Abca4O35600 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abca4O35600 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abca4O35600 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Abca4O35600 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abca4O35600 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Abca4O35600 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.55■□□□□ 0.24
Abca4O35600 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Abca4O35600 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abca4O35600 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.55■□□□□ 0.24
Abca4O35600 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abca4O35600 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Abca4O35600 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Abca4O35600 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abca4O35600 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abca4O35600 Gm15165-201ENSMUST00000118140 502 ntBASIC16.54■□□□□ 0.24
Abca4O35600 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.54■□□□□ 0.24
Abca4O35600 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Abca4O35600 Gm27321-201ENSMUST00000185021 205 ntBASIC16.54■□□□□ 0.24
Abca4O35600 Gm37025-201ENSMUST00000195159 829 ntBASIC16.54■□□□□ 0.24
Abca4O35600 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.54■□□□□ 0.24
Abca4O35600 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abca4O35600 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Abca4O35600 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abca4O35600 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Abca4O35600 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Abca4O35600 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abca4O35600 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abca4O35600 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Abca4O35600 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abca4O35600 Gm7862-201ENSMUST00000121461 292 ntBASIC16.54■□□□□ 0.24
Abca4O35600 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.54■□□□□ 0.24
Abca4O35600 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.54■□□□□ 0.24
Abca4O35600 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abca4O35600 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.54■□□□□ 0.24
Abca4O35600 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Abca4O35600 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abca4O35600 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abca4O35600 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abca4O35600 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.54■□□□□ 0.24
Abca4O35600 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abca4O35600 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.53■□□□□ 0.24
Abca4O35600 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.53■□□□□ 0.24
Abca4O35600 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.53■□□□□ 0.24
Abca4O35600 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Abca4O35600 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abca4O35600 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.53■□□□□ 0.24
Abca4O35600 Gm6296-201ENSMUST00000222599 943 ntBASIC16.53■□□□□ 0.24
Abca4O35600 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abca4O35600 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abca4O35600 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abca4O35600 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abca4O35600 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abca4O35600 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Abca4O35600 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abca4O35600 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Abca4O35600 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abca4O35600 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abca4O35600 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abca4O35600 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abca4O35600 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abca4O35600 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Abca4O35600 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Abca4O35600 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abca4O35600 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abca4O35600 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abca4O35600 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Abca4O35600 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Abca4O35600 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Abca4O35600 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.52■□□□□ 0.23
Abca4O35600 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Abca4O35600 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.52■□□□□ 0.23
Abca4O35600 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abca4O35600 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abca4O35600 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Abca4O35600 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.51■□□□□ 0.23
Abca4O35600 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Abca4O35600 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.51■□□□□ 0.23
Abca4O35600 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abca4O35600 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.51■□□□□ 0.23
Abca4O35600 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms