Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptch2O35595 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.01■□□□□ 0.47
Ptch2O35595 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptch2O35595 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptch2O35595 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptch2O35595 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Ptch2O35595 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ptch2O35595 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.01■□□□□ 0.47
Ptch2O35595 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.01■□□□□ 0.47
Ptch2O35595 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptch2O35595 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptch2O35595 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ptch2O35595 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ptch2O35595 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ptch2O35595 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ptch2O35595 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ptch2O35595 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ptch2O35595 Gm27463-201ENSMUST00000183569 57 ntBASIC18■□□□□ 0.47
Ptch2O35595 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18■□□□□ 0.47
Ptch2O35595 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ptch2O35595 Gm45058-201ENSMUST00000205810 766 ntBASIC18■□□□□ 0.47
Ptch2O35595 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ptch2O35595 Gm18032-201ENSMUST00000222541 538 ntBASIC18■□□□□ 0.47
Ptch2O35595 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ptch2O35595 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ptch2O35595 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ptch2O35595 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ptch2O35595 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ptch2O35595 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ptch2O35595 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ptch2O35595 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ptch2O35595 Fst-202ENSMUST00000223640 2612 ntBASIC18■□□□□ 0.47
Ptch2O35595 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ptch2O35595 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ptch2O35595 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptch2O35595 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.99■□□□□ 0.47
Ptch2O35595 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Ptch2O35595 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ptch2O35595 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptch2O35595 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ptch2O35595 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Ptch2O35595 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptch2O35595 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Ptch2O35595 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptch2O35595 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptch2O35595 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptch2O35595 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ptch2O35595 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.99■□□□□ 0.47
Ptch2O35595 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptch2O35595 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.99■□□□□ 0.47
Ptch2O35595 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptch2O35595 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ptch2O35595 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.99■□□□□ 0.47
Ptch2O35595 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptch2O35595 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ptch2O35595 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ptch2O35595 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptch2O35595 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptch2O35595 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.98■□□□□ 0.47
Ptch2O35595 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptch2O35595 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptch2O35595 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ptch2O35595 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ptch2O35595 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.98■□□□□ 0.47
Ptch2O35595 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptch2O35595 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ptch2O35595 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ptch2O35595 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ptch2O35595 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.98■□□□□ 0.47
Ptch2O35595 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptch2O35595 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ptch2O35595 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptch2O35595 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptch2O35595 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ptch2O35595 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
Ptch2O35595 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptch2O35595 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptch2O35595 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptch2O35595 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.97■□□□□ 0.47
Ptch2O35595 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptch2O35595 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.97■□□□□ 0.47
Ptch2O35595 Gm23634-201ENSMUST00000175071 91 ntBASIC17.97■□□□□ 0.47
Ptch2O35595 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptch2O35595 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Ptch2O35595 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ptch2O35595 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptch2O35595 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptch2O35595 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptch2O35595 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptch2O35595 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptch2O35595 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.96■□□□□ 0.47
Ptch2O35595 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptch2O35595 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ptch2O35595 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptch2O35595 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptch2O35595 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptch2O35595 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptch2O35595 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ptch2O35595 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Ptch2O35595 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms