Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.92□□□□□ -0.18
Efnb3O35393 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.92□□□□□ -0.18
Efnb3O35393 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Efnb3O35393 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Efnb3O35393 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Efnb3O35393 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Efnb3O35393 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Efnb3O35393 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Efnb3O35393 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Efnb3O35393 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.92□□□□□ -0.18
Efnb3O35393 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Efnb3O35393 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Efnb3O35393 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Efnb3O35393 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Efnb3O35393 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Efnb3O35393 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Efnb3O35393 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Efnb3O35393 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Efnb3O35393 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.91□□□□□ -0.18
Efnb3O35393 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Efnb3O35393 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Efnb3O35393 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Efnb3O35393 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Efnb3O35393 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.91□□□□□ -0.18
Efnb3O35393 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Efnb3O35393 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Efnb3O35393 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Efnb3O35393 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.91□□□□□ -0.18
Efnb3O35393 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.91□□□□□ -0.18
Efnb3O35393 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Efnb3O35393 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.91□□□□□ -0.18
Efnb3O35393 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Efnb3O35393 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.91□□□□□ -0.18
Efnb3O35393 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Efnb3O35393 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.91□□□□□ -0.18
Efnb3O35393 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Efnb3O35393 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Efnb3O35393 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Efnb3O35393 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Efnb3O35393 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Efnb3O35393 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Efnb3O35393 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Efnb3O35393 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Efnb3O35393 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Efnb3O35393 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Efnb3O35393 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Efnb3O35393 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Efnb3O35393 Gm13534-201ENSMUST00000121169 513 ntBASIC13.9□□□□□ -0.18
Efnb3O35393 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Efnb3O35393 Gm8495-201ENSMUST00000188740 694 ntBASIC13.9□□□□□ -0.18
Efnb3O35393 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Efnb3O35393 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Efnb3O35393 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.9□□□□□ -0.18
Efnb3O35393 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Efnb3O35393 Gm5874-201ENSMUST00000096101 508 ntBASIC13.9□□□□□ -0.18
Efnb3O35393 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Efnb3O35393 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Efnb3O35393 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Efnb3O35393 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Efnb3O35393 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Efnb3O35393 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Efnb3O35393 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Efnb3O35393 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.9□□□□□ -0.18
Efnb3O35393 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Efnb3O35393 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Efnb3O35393 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Efnb3O35393 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.89□□□□□ -0.19
Efnb3O35393 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Efnb3O35393 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Efnb3O35393 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Efnb3O35393 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.89□□□□□ -0.19
Efnb3O35393 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Efnb3O35393 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Efnb3O35393 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Efnb3O35393 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Efnb3O35393 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.89□□□□□ -0.19
Efnb3O35393 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Efnb3O35393 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Efnb3O35393 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Efnb3O35393 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Efnb3O35393 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.89□□□□□ -0.19
Efnb3O35393 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Efnb3O35393 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Efnb3O35393 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Efnb3O35393 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Efnb3O35393 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Efnb3O35393 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Efnb3O35393 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Efnb3O35393 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Efnb3O35393 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Efnb3O35393 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.88□□□□□ -0.19
Efnb3O35393 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.88□□□□□ -0.19
Efnb3O35393 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.88□□□□□ -0.19
Efnb3O35393 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Efnb3O35393 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Efnb3O35393 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Efnb3O35393 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Efnb3O35393 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Efnb3O35393 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Efnb3O35393 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms