Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col15a1O35206 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col15a1O35206 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
Col15a1O35206 Gm38342-201ENSMUST00000195710 2980 ntBASIC22.62■■□□□ 1.21
Col15a1O35206 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col15a1O35206 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col15a1O35206 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col15a1O35206 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Col15a1O35206 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC22.62■■□□□ 1.21
Col15a1O35206 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col15a1O35206 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Col15a1O35206 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Col15a1O35206 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col15a1O35206 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col15a1O35206 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC22.62■■□□□ 1.21
Col15a1O35206 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col15a1O35206 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Col15a1O35206 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col15a1O35206 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col15a1O35206 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col15a1O35206 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col15a1O35206 Idnk-204ENSMUST00000226010 1898 ntBASIC22.61■■□□□ 1.21
Col15a1O35206 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col15a1O35206 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col15a1O35206 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Col15a1O35206 Mir770-201ENSMUST00000103252 94 ntBASIC22.61■■□□□ 1.21
Col15a1O35206 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC22.61■■□□□ 1.21
Col15a1O35206 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC22.61■■□□□ 1.21
Col15a1O35206 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Col15a1O35206 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col15a1O35206 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col15a1O35206 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col15a1O35206 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col15a1O35206 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Col15a1O35206 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Col15a1O35206 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col15a1O35206 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col15a1O35206 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC22.6■■□□□ 1.21
Col15a1O35206 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC22.6■■□□□ 1.21
Col15a1O35206 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col15a1O35206 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col15a1O35206 Gm7153-201ENSMUST00000117092 455 ntBASIC22.6■■□□□ 1.21
Col15a1O35206 Gm27742-201ENSMUST00000184667 60 ntBASIC22.6■■□□□ 1.21
Col15a1O35206 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col15a1O35206 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
Col15a1O35206 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col15a1O35206 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col15a1O35206 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Col15a1O35206 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col15a1O35206 Fst-202ENSMUST00000223640 2612 ntBASIC22.59■■□□□ 1.21
Col15a1O35206 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC22.59■■□□□ 1.21
Col15a1O35206 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
Col15a1O35206 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col15a1O35206 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Col15a1O35206 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col15a1O35206 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC22.59■■□□□ 1.21
Col15a1O35206 Mir3081-201ENSMUST00000175305 84 ntBASIC22.59■■□□□ 1.21
Col15a1O35206 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col15a1O35206 Mir8112-201ENSMUST00000184382 131 ntBASIC22.59■■□□□ 1.21
Col15a1O35206 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Col15a1O35206 AC133598.3-202ENSMUST00000224219 531 ntBASIC22.59■■□□□ 1.21
Col15a1O35206 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col15a1O35206 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Col15a1O35206 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col15a1O35206 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Col15a1O35206 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col15a1O35206 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC22.59■■□□□ 1.21
Col15a1O35206 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col15a1O35206 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col15a1O35206 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col15a1O35206 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Col15a1O35206 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col15a1O35206 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col15a1O35206 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
Col15a1O35206 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
Col15a1O35206 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col15a1O35206 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col15a1O35206 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.2
Col15a1O35206 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC22.58■■□□□ 1.2
Col15a1O35206 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Col15a1O35206 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC22.57■■□□□ 1.2
Col15a1O35206 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col15a1O35206 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Col15a1O35206 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Col15a1O35206 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col15a1O35206 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col15a1O35206 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
Col15a1O35206 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col15a1O35206 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col15a1O35206 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col15a1O35206 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Col15a1O35206 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col15a1O35206 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC22.56■■□□□ 1.2
Col15a1O35206 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Col15a1O35206 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col15a1O35206 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Col15a1O35206 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Col15a1O35206 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Col15a1O35206 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col15a1O35206 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms