Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cl1O35188 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Cx3cl1O35188 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cl1O35188 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cl1O35188 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cl1O35188 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cl1O35188 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cl1O35188 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cl1O35188 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cl1O35188 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cl1O35188 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cl1O35188 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cl1O35188 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cl1O35188 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Cx3cl1O35188 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.49■□□□□ 0.23
Cx3cl1O35188 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cx3cl1O35188 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cx3cl1O35188 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.49■□□□□ 0.23
Cx3cl1O35188 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cl1O35188 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cl1O35188 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cl1O35188 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cl1O35188 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cl1O35188 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cl1O35188 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.49■□□□□ 0.23
Cx3cl1O35188 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cl1O35188 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cl1O35188 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cl1O35188 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Gm43183-201ENSMUST00000200632 547 ntBASIC16.48■□□□□ 0.23
Cx3cl1O35188 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cl1O35188 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cl1O35188 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cl1O35188 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Gm37292-201ENSMUST00000192062 758 ntBASIC16.47■□□□□ 0.23
Cx3cl1O35188 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.47■□□□□ 0.23
Cx3cl1O35188 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cl1O35188 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cx3cl1O35188 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Gm11643-201ENSMUST00000119578 864 ntBASIC16.46■□□□□ 0.23
Cx3cl1O35188 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.46■□□□□ 0.23
Cx3cl1O35188 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.46■□□□□ 0.23
Cx3cl1O35188 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cx3cl1O35188 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cx3cl1O35188 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.46■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms