Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac1O09106 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Hdac1O09106 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac1O09106 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac1O09106 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac1O09106 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Hdac1O09106 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Hdac1O09106 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Hdac1O09106 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac1O09106 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac1O09106 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.95■□□□□ 0.94
Hdac1O09106 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac1O09106 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Hdac1O09106 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac1O09106 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac1O09106 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Hdac1O09106 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Hdac1O09106 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Hdac1O09106 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac1O09106 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Hdac1O09106 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac1O09106 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac1O09106 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.94■□□□□ 0.94
Hdac1O09106 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac1O09106 Gm44549-201ENSMUST00000208351 577 ntBASIC20.94■□□□□ 0.94
Hdac1O09106 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac1O09106 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac1O09106 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac1O09106 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Hdac1O09106 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac1O09106 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac1O09106 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac1O09106 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Hdac1O09106 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac1O09106 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac1O09106 Gm6211-202ENSMUST00000167849 925 ntBASIC20.93■□□□□ 0.94
Hdac1O09106 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac1O09106 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
Hdac1O09106 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.93■□□□□ 0.94
Hdac1O09106 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Hdac1O09106 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac1O09106 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac1O09106 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac1O09106 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac1O09106 Gm13401-201ENSMUST00000117074 291 ntBASIC20.92■□□□□ 0.94
Hdac1O09106 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.92■□□□□ 0.94
Hdac1O09106 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Hdac1O09106 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac1O09106 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac1O09106 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac1O09106 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac1O09106 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac1O09106 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac1O09106 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac1O09106 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac1O09106 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac1O09106 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.91■□□□□ 0.94
Hdac1O09106 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac1O09106 Gm7290-201ENSMUST00000104990 617 ntBASIC20.91■□□□□ 0.94
Hdac1O09106 Gm12918-201ENSMUST00000120234 636 ntBASIC20.91■□□□□ 0.94
Hdac1O09106 Gm15710-201ENSMUST00000121821 636 ntBASIC20.91■□□□□ 0.94
Hdac1O09106 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.91■□□□□ 0.94
Hdac1O09106 Gm5075-201ENSMUST00000196916 622 ntBASIC20.91■□□□□ 0.94
Hdac1O09106 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.91■□□□□ 0.94
Hdac1O09106 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac1O09106 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac1O09106 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.91■□□□□ 0.94
Hdac1O09106 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.91■□□□□ 0.94
Hdac1O09106 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.91■□□□□ 0.94
Hdac1O09106 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac1O09106 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac1O09106 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac1O09106 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac1O09106 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Hdac1O09106 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac1O09106 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac1O09106 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac1O09106 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac1O09106 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.9■□□□□ 0.94
Hdac1O09106 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac1O09106 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Hdac1O09106 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.9■□□□□ 0.94
Hdac1O09106 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac1O09106 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac1O09106 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.9■□□□□ 0.94
Hdac1O09106 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.9■□□□□ 0.94
Hdac1O09106 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac1O09106 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac1O09106 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.9■□□□□ 0.94
Hdac1O09106 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac1O09106 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hdac1O09106 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Hdac1O09106 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hdac1O09106 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hdac1O09106 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hdac1O09106 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.89■□□□□ 0.93
Hdac1O09106 Gm10849-201ENSMUST00000100397 618 ntBASIC20.89■□□□□ 0.93
Hdac1O09106 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.89■□□□□ 0.93
Hdac1O09106 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.89■□□□□ 0.93
Hdac1O09106 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms