Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trove2O08848 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trove2O08848 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trove2O08848 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trove2O08848 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.05■□□□□ 0.48
Trove2O08848 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trove2O08848 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trove2O08848 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Trove2O08848 Gm13534-201ENSMUST00000121169 513 ntBASIC18.05■□□□□ 0.48
Trove2O08848 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.05■□□□□ 0.48
Trove2O08848 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trove2O08848 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.05■□□□□ 0.48
Trove2O08848 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trove2O08848 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trove2O08848 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trove2O08848 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trove2O08848 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.05■□□□□ 0.48
Trove2O08848 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.05■□□□□ 0.48
Trove2O08848 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trove2O08848 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trove2O08848 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trove2O08848 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trove2O08848 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trove2O08848 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.04■□□□□ 0.48
Trove2O08848 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.04■□□□□ 0.48
Trove2O08848 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trove2O08848 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.04■□□□□ 0.48
Trove2O08848 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.04■□□□□ 0.48
Trove2O08848 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.04■□□□□ 0.48
Trove2O08848 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trove2O08848 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.04■□□□□ 0.48
Trove2O08848 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.04■□□□□ 0.48
Trove2O08848 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trove2O08848 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trove2O08848 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trove2O08848 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trove2O08848 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trove2O08848 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trove2O08848 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trove2O08848 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.04■□□□□ 0.48
Trove2O08848 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trove2O08848 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trove2O08848 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trove2O08848 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trove2O08848 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trove2O08848 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trove2O08848 Gm42642-201ENSMUST00000200683 355 ntBASIC18.03■□□□□ 0.48
Trove2O08848 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trove2O08848 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trove2O08848 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trove2O08848 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trove2O08848 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trove2O08848 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trove2O08848 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trove2O08848 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trove2O08848 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.02■□□□□ 0.48
Trove2O08848 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trove2O08848 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trove2O08848 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trove2O08848 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.02■□□□□ 0.48
Trove2O08848 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trove2O08848 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Trove2O08848 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trove2O08848 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trove2O08848 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.02■□□□□ 0.47
Trove2O08848 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trove2O08848 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trove2O08848 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trove2O08848 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trove2O08848 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trove2O08848 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trove2O08848 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trove2O08848 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.01■□□□□ 0.47
Trove2O08848 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trove2O08848 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trove2O08848 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trove2O08848 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trove2O08848 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trove2O08848 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trove2O08848 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trove2O08848 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trove2O08848 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trove2O08848 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trove2O08848 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trove2O08848 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trove2O08848 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trove2O08848 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trove2O08848 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trove2O08848 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Trove2O08848 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trove2O08848 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trove2O08848 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18■□□□□ 0.47
Trove2O08848 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trove2O08848 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18■□□□□ 0.47
Trove2O08848 Gm18284-201ENSMUST00000172604 624 ntBASIC18■□□□□ 0.47
Trove2O08848 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18■□□□□ 0.47
Trove2O08848 Gm10033-202ENSMUST00000211874 928 ntBASIC18■□□□□ 0.47
Trove2O08848 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trove2O08848 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trove2O08848 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms