Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ercc2O08811 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ercc2O08811 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ercc2O08811 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ercc2O08811 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Ercc2O08811 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18■□□□□ 0.47
Ercc2O08811 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ercc2O08811 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ercc2O08811 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ercc2O08811 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ercc2O08811 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ercc2O08811 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ercc2O08811 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ercc2O08811 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Ercc2O08811 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ercc2O08811 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ercc2O08811 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ercc2O08811 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ercc2O08811 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ercc2O08811 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ercc2O08811 Gm8969-201ENSMUST00000199694 526 ntBASIC17.99■□□□□ 0.47
Ercc2O08811 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.99■□□□□ 0.47
Ercc2O08811 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ercc2O08811 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ercc2O08811 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ercc2O08811 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.99■□□□□ 0.47
Ercc2O08811 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ercc2O08811 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ercc2O08811 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ercc2O08811 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ercc2O08811 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.99■□□□□ 0.47
Ercc2O08811 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ercc2O08811 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc2O08811 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc2O08811 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc2O08811 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc2O08811 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc2O08811 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ercc2O08811 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc2O08811 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.98■□□□□ 0.47
Ercc2O08811 Gm12382-201ENSMUST00000122005 922 ntBASIC17.98■□□□□ 0.47
Ercc2O08811 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.98■□□□□ 0.47
Ercc2O08811 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc2O08811 Mir8112-201ENSMUST00000184382 131 ntBASIC17.98■□□□□ 0.47
Ercc2O08811 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.98■□□□□ 0.47
Ercc2O08811 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc2O08811 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc2O08811 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc2O08811 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc2O08811 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc2O08811 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc2O08811 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc2O08811 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc2O08811 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.97■□□□□ 0.47
Ercc2O08811 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.97■□□□□ 0.47
Ercc2O08811 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ercc2O08811 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc2O08811 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.97■□□□□ 0.47
Ercc2O08811 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc2O08811 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.97■□□□□ 0.47
Ercc2O08811 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc2O08811 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ercc2O08811 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc2O08811 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc2O08811 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ercc2O08811 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc2O08811 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc2O08811 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc2O08811 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc2O08811 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Ercc2O08811 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc2O08811 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc2O08811 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.96■□□□□ 0.47
Ercc2O08811 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc2O08811 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc2O08811 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc2O08811 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc2O08811 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ercc2O08811 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.96■□□□□ 0.47
Ercc2O08811 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc2O08811 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ercc2O08811 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc2O08811 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc2O08811 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ercc2O08811 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc2O08811 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc2O08811 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc2O08811 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.95■□□□□ 0.46
Ercc2O08811 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc2O08811 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.95■□□□□ 0.46
Ercc2O08811 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc2O08811 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc2O08811 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Ercc2O08811 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc2O08811 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc2O08811 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc2O08811 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ercc2O08811 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc2O08811 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc2O08811 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms