Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Dctn1O08788 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
Dctn1O08788 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Dctn1O08788 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Dctn1O08788 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Dctn1O08788 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Dctn1O08788 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
Dctn1O08788 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
Dctn1O08788 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Dctn1O08788 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Dctn1O08788 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Dctn1O08788 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Dctn1O08788 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Dctn1O08788 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Dctn1O08788 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Dctn1O08788 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.7■■□□□ 1.06
Dctn1O08788 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Dctn1O08788 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Dctn1O08788 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Dctn1O08788 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Dctn1O08788 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Dctn1O08788 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.7■■□□□ 1.06
Dctn1O08788 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Dctn1O08788 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Dctn1O08788 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Dctn1O08788 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Dctn1O08788 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Dctn1O08788 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Dctn1O08788 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.69■■□□□ 1.06
Dctn1O08788 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Dctn1O08788 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Dctn1O08788 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Dctn1O08788 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Dctn1O08788 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Dctn1O08788 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Dctn1O08788 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Dctn1O08788 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Dctn1O08788 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Dctn1O08788 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Dctn1O08788 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Dctn1O08788 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.69■■□□□ 1.06
Dctn1O08788 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Dctn1O08788 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Dctn1O08788 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Dctn1O08788 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Dctn1O08788 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Dctn1O08788 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.68■■□□□ 1.06
Dctn1O08788 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Dctn1O08788 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Dctn1O08788 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Dctn1O08788 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Dctn1O08788 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Dctn1O08788 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Dctn1O08788 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Dctn1O08788 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.67■■□□□ 1.06
Dctn1O08788 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Dctn1O08788 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC21.67■■□□□ 1.06
Dctn1O08788 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Dctn1O08788 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Dctn1O08788 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Dctn1O08788 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Dctn1O08788 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Dctn1O08788 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dctn1O08788 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dctn1O08788 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dctn1O08788 Fst-202ENSMUST00000223640 2612 ntBASIC21.66■■□□□ 1.06
Dctn1O08788 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dctn1O08788 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dctn1O08788 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.66■■□□□ 1.06
Dctn1O08788 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Dctn1O08788 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Dctn1O08788 Gm27389-201ENSMUST00000183622 195 ntBASIC21.66■■□□□ 1.06
Dctn1O08788 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.66■■□□□ 1.06
Dctn1O08788 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Dctn1O08788 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dctn1O08788 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Dctn1O08788 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Dctn1O08788 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dctn1O08788 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dctn1O08788 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Dctn1O08788 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dctn1O08788 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Dctn1O08788 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dctn1O08788 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dctn1O08788 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Dctn1O08788 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Dctn1O08788 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Dctn1O08788 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.65■■□□□ 1.06
Dctn1O08788 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Dctn1O08788 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Dctn1O08788 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Dctn1O08788 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.65■■□□□ 1.06
Dctn1O08788 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Dctn1O08788 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Dctn1O08788 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Dctn1O08788 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Dctn1O08788 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.65■■□□□ 1.06
Dctn1O08788 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Dctn1O08788 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Dctn1O08788 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.64■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms