Protein–RNA interactions for Protein: O08750

Nfil3, Nuclear factor interleukin-3-regulated protein, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfil3O08750 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Nfil3O08750 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.21■□□□□ 0.83
Nfil3O08750 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nfil3O08750 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nfil3O08750 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nfil3O08750 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nfil3O08750 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.21■□□□□ 0.83
Nfil3O08750 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Nfil3O08750 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nfil3O08750 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nfil3O08750 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nfil3O08750 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.2■□□□□ 0.82
Nfil3O08750 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.2■□□□□ 0.82
Nfil3O08750 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nfil3O08750 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nfil3O08750 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nfil3O08750 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nfil3O08750 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nfil3O08750 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nfil3O08750 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nfil3O08750 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Nfil3O08750 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nfil3O08750 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Nfil3O08750 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nfil3O08750 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nfil3O08750 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.19■□□□□ 0.82
Nfil3O08750 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nfil3O08750 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nfil3O08750 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.19■□□□□ 0.82
Nfil3O08750 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.19■□□□□ 0.82
Nfil3O08750 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nfil3O08750 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.19■□□□□ 0.82
Nfil3O08750 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.19■□□□□ 0.82
Nfil3O08750 Gm4974-201ENSMUST00000209974 875 ntBASIC20.19■□□□□ 0.82
Nfil3O08750 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.19■□□□□ 0.82
Nfil3O08750 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nfil3O08750 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nfil3O08750 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nfil3O08750 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nfil3O08750 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nfil3O08750 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nfil3O08750 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nfil3O08750 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
Nfil3O08750 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Nfil3O08750 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.18■□□□□ 0.82
Nfil3O08750 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.18■□□□□ 0.82
Nfil3O08750 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.18■□□□□ 0.82
Nfil3O08750 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nfil3O08750 Gm5417-201ENSMUST00000079706 384 ntBASIC20.18■□□□□ 0.82
Nfil3O08750 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nfil3O08750 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nfil3O08750 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nfil3O08750 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nfil3O08750 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nfil3O08750 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Nfil3O08750 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nfil3O08750 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nfil3O08750 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nfil3O08750 Gm12085-201ENSMUST00000119263 940 ntBASIC20.17■□□□□ 0.82
Nfil3O08750 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nfil3O08750 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.17■□□□□ 0.82
Nfil3O08750 Timm23-208ENSMUST00000226683 750 ntBASIC20.17■□□□□ 0.82
Nfil3O08750 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nfil3O08750 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Nfil3O08750 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nfil3O08750 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nfil3O08750 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nfil3O08750 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nfil3O08750 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nfil3O08750 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nfil3O08750 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nfil3O08750 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nfil3O08750 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nfil3O08750 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.16■□□□□ 0.82
Nfil3O08750 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.16■□□□□ 0.82
Nfil3O08750 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.16■□□□□ 0.82
Nfil3O08750 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.16■□□□□ 0.82
Nfil3O08750 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.16■□□□□ 0.82
Nfil3O08750 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.16■□□□□ 0.82
Nfil3O08750 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nfil3O08750 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nfil3O08750 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nfil3O08750 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nfil3O08750 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Nfil3O08750 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nfil3O08750 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nfil3O08750 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nfil3O08750 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nfil3O08750 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nfil3O08750 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Nfil3O08750 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Nfil3O08750 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nfil3O08750 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nfil3O08750 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Nfil3O08750 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Nfil3O08750 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.15■□□□□ 0.82
Nfil3O08750 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.15■□□□□ 0.82
Nfil3O08750 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nfil3O08750 Gm21814-202ENSMUST00000203277 873 ntBASIC20.15■□□□□ 0.82
Nfil3O08750 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms