Protein–RNA interactions for Protein: J3QP37

Smim22, MCG1038270, isoform CRA_a, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim22J3QP37 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smim22J3QP37 Mir6349-201ENSMUST00000184059 97 ntBASIC17.57■□□□□ 0.4
Smim22J3QP37 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.57■□□□□ 0.4
Smim22J3QP37 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smim22J3QP37 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smim22J3QP37 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smim22J3QP37 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smim22J3QP37 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smim22J3QP37 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smim22J3QP37 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smim22J3QP37 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smim22J3QP37 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smim22J3QP37 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smim22J3QP37 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smim22J3QP37 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.56■□□□□ 0.4
Smim22J3QP37 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smim22J3QP37 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smim22J3QP37 Olfr129-201ENSMUST00000122318 993 ntBASIC17.56■□□□□ 0.4
Smim22J3QP37 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.56■□□□□ 0.4
Smim22J3QP37 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.56■□□□□ 0.4
Smim22J3QP37 Mir5131-201ENSMUST00000175426 93 ntBASIC17.56■□□□□ 0.4
Smim22J3QP37 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smim22J3QP37 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.56■□□□□ 0.4
Smim22J3QP37 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smim22J3QP37 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.56■□□□□ 0.4
Smim22J3QP37 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Smim22J3QP37 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smim22J3QP37 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smim22J3QP37 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smim22J3QP37 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smim22J3QP37 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smim22J3QP37 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smim22J3QP37 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smim22J3QP37 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smim22J3QP37 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smim22J3QP37 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smim22J3QP37 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smim22J3QP37 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.55■□□□□ 0.4
Smim22J3QP37 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.55■□□□□ 0.4
Smim22J3QP37 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Smim22J3QP37 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Smim22J3QP37 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smim22J3QP37 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smim22J3QP37 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Smim22J3QP37 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.55■□□□□ 0.4
Smim22J3QP37 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smim22J3QP37 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smim22J3QP37 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smim22J3QP37 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smim22J3QP37 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smim22J3QP37 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smim22J3QP37 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smim22J3QP37 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
Smim22J3QP37 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smim22J3QP37 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smim22J3QP37 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Smim22J3QP37 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smim22J3QP37 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Smim22J3QP37 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Smim22J3QP37 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smim22J3QP37 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smim22J3QP37 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smim22J3QP37 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smim22J3QP37 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smim22J3QP37 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smim22J3QP37 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smim22J3QP37 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smim22J3QP37 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smim22J3QP37 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.53■□□□□ 0.4
Smim22J3QP37 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.53■□□□□ 0.4
Smim22J3QP37 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smim22J3QP37 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smim22J3QP37 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Smim22J3QP37 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Smim22J3QP37 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.53■□□□□ 0.4
Smim22J3QP37 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Smim22J3QP37 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smim22J3QP37 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smim22J3QP37 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Smim22J3QP37 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smim22J3QP37 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smim22J3QP37 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smim22J3QP37 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smim22J3QP37 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Smim22J3QP37 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smim22J3QP37 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.52■□□□□ 0.4
Smim22J3QP37 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Smim22J3QP37 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Smim22J3QP37 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.52■□□□□ 0.4
Smim22J3QP37 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smim22J3QP37 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.52■□□□□ 0.4
Smim22J3QP37 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smim22J3QP37 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smim22J3QP37 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Smim22J3QP37 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Smim22J3QP37 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smim22J3QP37 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smim22J3QP37 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smim22J3QP37 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smim22J3QP37 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms