Protein–RNA interactions for Protein: J3QMS9

E030018B13Rik, RIKEN cDNA E030018B13 gene, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E030018B13RikJ3QMS9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
E030018B13RikJ3QMS9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
E030018B13RikJ3QMS9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
E030018B13RikJ3QMS9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
E030018B13RikJ3QMS9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
E030018B13RikJ3QMS9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.21□□□□□ -0.13
E030018B13RikJ3QMS9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
E030018B13RikJ3QMS9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.21□□□□□ -0.13
E030018B13RikJ3QMS9 Gm38027-201ENSMUST00000192315 235 ntBASIC14.21□□□□□ -0.13
E030018B13RikJ3QMS9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.21□□□□□ -0.13
E030018B13RikJ3QMS9 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.21□□□□□ -0.13
E030018B13RikJ3QMS9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
E030018B13RikJ3QMS9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
E030018B13RikJ3QMS9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
E030018B13RikJ3QMS9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
E030018B13RikJ3QMS9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
E030018B13RikJ3QMS9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
E030018B13RikJ3QMS9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
E030018B13RikJ3QMS9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
E030018B13RikJ3QMS9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
E030018B13RikJ3QMS9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
E030018B13RikJ3QMS9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
E030018B13RikJ3QMS9 Gm37025-201ENSMUST00000195159 829 ntBASIC14.2□□□□□ -0.14
E030018B13RikJ3QMS9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
E030018B13RikJ3QMS9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
E030018B13RikJ3QMS9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
E030018B13RikJ3QMS9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
E030018B13RikJ3QMS9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
E030018B13RikJ3QMS9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
E030018B13RikJ3QMS9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
E030018B13RikJ3QMS9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
E030018B13RikJ3QMS9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Gm17661-201ENSMUST00000170317 270 ntBASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Gm37055-201ENSMUST00000191866 133 ntBASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
E030018B13RikJ3QMS9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms