Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Sh3tc1G3X9F6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC21.29■■□□□ 1
Sh3tc1G3X9F6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.29■■□□□ 1
Sh3tc1G3X9F6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sh3tc1G3X9F6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sh3tc1G3X9F6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Sh3tc1G3X9F6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC21.29■■□□□ 1
Sh3tc1G3X9F6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.29■■□□□ 1
Sh3tc1G3X9F6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.28■■□□□ 1
Sh3tc1G3X9F6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3tc1G3X9F6 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.28■■□□□ 1
Sh3tc1G3X9F6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3tc1G3X9F6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.28■■□□□ 1
Sh3tc1G3X9F6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3tc1G3X9F6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.28■■□□□ 1
Sh3tc1G3X9F6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3tc1G3X9F6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3tc1G3X9F6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3tc1G3X9F6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Sh3tc1G3X9F6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.28■■□□□ 1
Sh3tc1G3X9F6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.28■■□□□ 1
Sh3tc1G3X9F6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3tc1G3X9F6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3tc1G3X9F6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3tc1G3X9F6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3tc1G3X9F6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3tc1G3X9F6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3tc1G3X9F6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3tc1G3X9F6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.27■■□□□ 1
Sh3tc1G3X9F6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3tc1G3X9F6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3tc1G3X9F6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3tc1G3X9F6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
Sh3tc1G3X9F6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sh3tc1G3X9F6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
Sh3tc1G3X9F6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Sh3tc1G3X9F6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.27■□□□□ 0.99
Sh3tc1G3X9F6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
Sh3tc1G3X9F6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3tc1G3X9F6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3tc1G3X9F6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3tc1G3X9F6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
Sh3tc1G3X9F6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3tc1G3X9F6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Sh3tc1G3X9F6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3tc1G3X9F6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Sh3tc1G3X9F6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3tc1G3X9F6 Gm11950-201ENSMUST00000121615 838 ntBASIC21.26■□□□□ 0.99
Sh3tc1G3X9F6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.26■□□□□ 0.99
Sh3tc1G3X9F6 Gm26039-201ENSMUST00000158152 144 ntBASIC21.26■□□□□ 0.99
Sh3tc1G3X9F6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.26■□□□□ 0.99
Sh3tc1G3X9F6 Gm28033-201ENSMUST00000184224 96 ntBASIC21.26■□□□□ 0.99
Sh3tc1G3X9F6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3tc1G3X9F6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3tc1G3X9F6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3tc1G3X9F6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3tc1G3X9F6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3tc1G3X9F6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3tc1G3X9F6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3tc1G3X9F6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3tc1G3X9F6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3tc1G3X9F6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3tc1G3X9F6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3tc1G3X9F6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3tc1G3X9F6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Sh3tc1G3X9F6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3tc1G3X9F6 Gm18669-201ENSMUST00000216049 778 ntBASIC21.25■□□□□ 0.99
Sh3tc1G3X9F6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3tc1G3X9F6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3tc1G3X9F6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.25■□□□□ 0.99
Sh3tc1G3X9F6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3tc1G3X9F6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.24■□□□□ 0.99
Sh3tc1G3X9F6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3tc1G3X9F6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3tc1G3X9F6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3tc1G3X9F6 Gm3272-201ENSMUST00000181181 1229 ntBASIC21.24■□□□□ 0.99
Sh3tc1G3X9F6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3tc1G3X9F6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3tc1G3X9F6 Gm10566-201ENSMUST00000086739 996 ntBASIC21.24■□□□□ 0.99
Sh3tc1G3X9F6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc1G3X9F6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Sh3tc1G3X9F6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc1G3X9F6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Sh3tc1G3X9F6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Sh3tc1G3X9F6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc1G3X9F6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc1G3X9F6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc1G3X9F6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc1G3X9F6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC21.23■□□□□ 0.99
Sh3tc1G3X9F6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC21.23■□□□□ 0.99
Sh3tc1G3X9F6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Sh3tc1G3X9F6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc1G3X9F6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc1G3X9F6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc1G3X9F6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3tc1G3X9F6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Sh3tc1G3X9F6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3tc1G3X9F6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3tc1G3X9F6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Sh3tc1G3X9F6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms