Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh9F8VPK8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh9F8VPK8 Flg-201ENSMUST00000050758 1488 ntBASIC18.05■□□□□ 0.48
Pcdh9F8VPK8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh9F8VPK8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh9F8VPK8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh9F8VPK8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh9F8VPK8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh9F8VPK8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh9F8VPK8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdh9F8VPK8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh9F8VPK8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh9F8VPK8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.04■□□□□ 0.48
Pcdh9F8VPK8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdh9F8VPK8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdh9F8VPK8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh9F8VPK8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh9F8VPK8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh9F8VPK8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh9F8VPK8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Pcdh9F8VPK8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh9F8VPK8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdh9F8VPK8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdh9F8VPK8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh9F8VPK8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdh9F8VPK8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Mir2861-201ENSMUST00000175539 82 ntBASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Gm10602-201ENSMUST00000098239 609 ntBASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdh9F8VPK8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh9F8VPK8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh9F8VPK8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh9F8VPK8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh9F8VPK8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh9F8VPK8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh9F8VPK8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Pcdh9F8VPK8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh9F8VPK8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh9F8VPK8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Pcdh9F8VPK8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh9F8VPK8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh9F8VPK8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.02■□□□□ 0.47
Pcdh9F8VPK8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh9F8VPK8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh9F8VPK8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh9F8VPK8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh9F8VPK8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Pcdh9F8VPK8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh9F8VPK8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh9F8VPK8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh9F8VPK8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms