Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc188F6WEU2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc188F6WEU2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc188F6WEU2 Gm15372-201ENSMUST00000120729 834 ntBASIC17.85■□□□□ 0.45
Ccdc188F6WEU2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Ccdc188F6WEU2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Ccdc188F6WEU2 Gm37025-201ENSMUST00000195159 829 ntBASIC17.85■□□□□ 0.45
Ccdc188F6WEU2 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.85■□□□□ 0.45
Ccdc188F6WEU2 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.85■□□□□ 0.45
Ccdc188F6WEU2 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.85■□□□□ 0.45
Ccdc188F6WEU2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc188F6WEU2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc188F6WEU2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ccdc188F6WEU2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc188F6WEU2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc188F6WEU2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc188F6WEU2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc188F6WEU2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc188F6WEU2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc188F6WEU2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Ccdc188F6WEU2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc188F6WEU2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.84■□□□□ 0.45
Ccdc188F6WEU2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.84■□□□□ 0.45
Ccdc188F6WEU2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc188F6WEU2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc188F6WEU2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc188F6WEU2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc188F6WEU2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc188F6WEU2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc188F6WEU2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ccdc188F6WEU2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc188F6WEU2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc188F6WEU2 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.84■□□□□ 0.45
Ccdc188F6WEU2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ccdc188F6WEU2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc188F6WEU2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc188F6WEU2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc188F6WEU2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Ccdc188F6WEU2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc188F6WEU2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc188F6WEU2 Gm14494-201ENSMUST00000118786 435 ntBASIC17.83■□□□□ 0.44
Ccdc188F6WEU2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.83■□□□□ 0.44
Ccdc188F6WEU2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.83■□□□□ 0.44
Ccdc188F6WEU2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.83■□□□□ 0.44
Ccdc188F6WEU2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ccdc188F6WEU2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc188F6WEU2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc188F6WEU2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc188F6WEU2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc188F6WEU2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Psmb5-202ENSMUST00000227257 622 ntBASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc188F6WEU2 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.81■□□□□ 0.44
Ccdc188F6WEU2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc188F6WEU2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.81■□□□□ 0.44
Ccdc188F6WEU2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc188F6WEU2 Mir5126-201ENSMUST00000175513 77 ntBASIC17.81■□□□□ 0.44
Ccdc188F6WEU2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.81■□□□□ 0.44
Ccdc188F6WEU2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc188F6WEU2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Ccdc188F6WEU2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc188F6WEU2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc188F6WEU2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc188F6WEU2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ccdc188F6WEU2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc188F6WEU2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc188F6WEU2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc188F6WEU2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc188F6WEU2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc188F6WEU2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.8■□□□□ 0.44
Ccdc188F6WEU2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ccdc188F6WEU2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc188F6WEU2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc188F6WEU2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc188F6WEU2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc188F6WEU2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc188F6WEU2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms