Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.85■□□□□ 0.45
Ccdc149F6V035 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc149F6V035 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc149F6V035 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc149F6V035 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc149F6V035 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc149F6V035 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc149F6V035 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc149F6V035 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc149F6V035 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc149F6V035 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc149F6V035 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc149F6V035 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.84■□□□□ 0.45
Ccdc149F6V035 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc149F6V035 Gm6659-201ENSMUST00000174752 547 ntBASIC17.84■□□□□ 0.45
Ccdc149F6V035 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.84■□□□□ 0.45
Ccdc149F6V035 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.84■□□□□ 0.45
Ccdc149F6V035 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc149F6V035 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc149F6V035 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc149F6V035 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc149F6V035 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc149F6V035 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc149F6V035 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Ccdc149F6V035 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc149F6V035 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc149F6V035 Gm10013-201ENSMUST00000106074 672 ntBASIC17.83■□□□□ 0.44
Ccdc149F6V035 Gm7638-201ENSMUST00000121348 967 ntBASIC17.83■□□□□ 0.44
Ccdc149F6V035 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc149F6V035 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc149F6V035 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc149F6V035 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc149F6V035 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc149F6V035 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc149F6V035 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc149F6V035 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Ccdc149F6V035 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc149F6V035 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.82■□□□□ 0.44
Ccdc149F6V035 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc149F6V035 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc149F6V035 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc149F6V035 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc149F6V035 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc149F6V035 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc149F6V035 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc149F6V035 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.82■□□□□ 0.44
Ccdc149F6V035 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc149F6V035 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc149F6V035 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc149F6V035 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc149F6V035 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc149F6V035 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc149F6V035 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ccdc149F6V035 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc149F6V035 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc149F6V035 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc149F6V035 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc149F6V035 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.81■□□□□ 0.44
Ccdc149F6V035 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc149F6V035 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc149F6V035 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ccdc149F6V035 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc149F6V035 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc149F6V035 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc149F6V035 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc149F6V035 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc149F6V035 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Gm18032-201ENSMUST00000222541 538 ntBASIC17.8■□□□□ 0.44
Ccdc149F6V035 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc149F6V035 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms