Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Gm11780-201ENSMUST00000136880 516 ntBASIC9.94□□□□□ -0.82
Herc1E9PZP8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC9.94□□□□□ -0.82
Herc1E9PZP8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Gm13823-201ENSMUST00000119930 345 ntBASIC9.93□□□□□ -0.82
Herc1E9PZP8 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC9.93□□□□□ -0.82
Herc1E9PZP8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC9.93□□□□□ -0.82
Herc1E9PZP8 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Gm27437-201ENSMUST00000183429 107 ntBASIC9.93□□□□□ -0.82
Herc1E9PZP8 Gm38319-201ENSMUST00000194537 1266 ntBASIC9.93□□□□□ -0.82
Herc1E9PZP8 AC124549.3-201ENSMUST00000225541 367 ntBASIC9.93□□□□□ -0.82
Herc1E9PZP8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Herc1E9PZP8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC9.93□□□□□ -0.82
Herc1E9PZP8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Herc1E9PZP8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Herc1E9PZP8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC9.92□□□□□ -0.82
Herc1E9PZP8 Gm8309-201ENSMUST00000206627 1448 ntBASIC9.92□□□□□ -0.82
Herc1E9PZP8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Herc1E9PZP8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Herc1E9PZP8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Gm37820-201ENSMUST00000194021 2147 ntBASIC9.92□□□□□ -0.82
Herc1E9PZP8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Herc1E9PZP8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Herc1E9PZP8 Gm13418-201ENSMUST00000119097 944 ntBASIC9.91□□□□□ -0.82
Herc1E9PZP8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Gm18856-201ENSMUST00000178096 1374 ntBASIC9.91□□□□□ -0.82
Herc1E9PZP8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms