Protein–RNA interactions for Protein: D3Z5T1

Ccdc78, Coiled-coil domain-containing protein 78, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc78D3Z5T1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc78D3Z5T1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc78D3Z5T1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc78D3Z5T1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccdc78D3Z5T1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc78D3Z5T1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc78D3Z5T1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc78D3Z5T1 Gm30025-201ENSMUST00000218555 728 ntBASIC19.73■□□□□ 0.75
Ccdc78D3Z5T1 Odf3b-204ENSMUST00000227834 930 ntBASIC19.73■□□□□ 0.75
Ccdc78D3Z5T1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc78D3Z5T1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc78D3Z5T1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccdc78D3Z5T1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ccdc78D3Z5T1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc78D3Z5T1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc78D3Z5T1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc78D3Z5T1 Rarb-207ENSMUST00000225921 2756 ntBASIC19.72■□□□□ 0.75
Ccdc78D3Z5T1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc78D3Z5T1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc78D3Z5T1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc78D3Z5T1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc78D3Z5T1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc78D3Z5T1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Ccdc78D3Z5T1 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.72■□□□□ 0.75
Ccdc78D3Z5T1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.72■□□□□ 0.75
Ccdc78D3Z5T1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc78D3Z5T1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc78D3Z5T1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc78D3Z5T1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc78D3Z5T1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc78D3Z5T1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc78D3Z5T1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Gm10418-201ENSMUST00000100943 576 ntBASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Gm43799-201ENSMUST00000201845 579 ntBASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc78D3Z5T1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 Gm4974-201ENSMUST00000209974 875 ntBASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc78D3Z5T1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc78D3Z5T1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc78D3Z5T1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Ccdc78D3Z5T1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc78D3Z5T1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc78D3Z5T1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.68■□□□□ 0.74
Ccdc78D3Z5T1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms