Protein–RNA interactions for Protein: D3YY23

Lonrf1, LON peptidase N-terminal domain and RING finger protein 1, mousemouse

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf1D3YY23 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lonrf1D3YY23 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lonrf1D3YY23 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lonrf1D3YY23 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lonrf1D3YY23 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Lonrf1D3YY23 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lonrf1D3YY23 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Lonrf1D3YY23 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lonrf1D3YY23 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.15■□□□□ 0.5
Lonrf1D3YY23 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lonrf1D3YY23 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lonrf1D3YY23 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lonrf1D3YY23 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.15■□□□□ 0.5
Lonrf1D3YY23 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lonrf1D3YY23 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lonrf1D3YY23 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Lonrf1D3YY23 Flg-201ENSMUST00000050758 1488 ntBASIC18.14■□□□□ 0.5
Lonrf1D3YY23 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lonrf1D3YY23 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lonrf1D3YY23 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lonrf1D3YY23 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lonrf1D3YY23 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lonrf1D3YY23 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Lonrf1D3YY23 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.13■□□□□ 0.49
Lonrf1D3YY23 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lonrf1D3YY23 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lonrf1D3YY23 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.13■□□□□ 0.49
Lonrf1D3YY23 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lonrf1D3YY23 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lonrf1D3YY23 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Lonrf1D3YY23 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.13■□□□□ 0.49
Lonrf1D3YY23 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lonrf1D3YY23 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Lonrf1D3YY23 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lonrf1D3YY23 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lonrf1D3YY23 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Mir5133-201ENSMUST00000174955 77 ntBASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Rab3c-203ENSMUST00000224180 967 ntBASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lonrf1D3YY23 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lonrf1D3YY23 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lonrf1D3YY23 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lonrf1D3YY23 Gm10418-201ENSMUST00000100943 576 ntBASIC18.11■□□□□ 0.49
Lonrf1D3YY23 Gm27405-201ENSMUST00000184201 112 ntBASIC18.11■□□□□ 0.49
Lonrf1D3YY23 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Lonrf1D3YY23 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lonrf1D3YY23 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.11■□□□□ 0.49
Lonrf1D3YY23 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lonrf1D3YY23 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.11■□□□□ 0.49
Lonrf1D3YY23 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lonrf1D3YY23 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lonrf1D3YY23 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lonrf1D3YY23 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lonrf1D3YY23 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Lonrf1D3YY23 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lonrf1D3YY23 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Lonrf1D3YY23 Mir8112-201ENSMUST00000184382 131 ntBASIC18.1■□□□□ 0.49
Lonrf1D3YY23 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.1■□□□□ 0.49
Lonrf1D3YY23 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.1■□□□□ 0.49
Lonrf1D3YY23 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lonrf1D3YY23 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lonrf1D3YY23 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Lonrf1D3YY23 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms