Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim30cD3YVI9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.21■□□□□ 0.67
Trim30cD3YVI9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim30cD3YVI9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim30cD3YVI9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim30cD3YVI9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Trim30cD3YVI9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim30cD3YVI9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim30cD3YVI9 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.2■□□□□ 0.66
Trim30cD3YVI9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim30cD3YVI9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.2■□□□□ 0.66
Trim30cD3YVI9 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.2■□□□□ 0.66
Trim30cD3YVI9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim30cD3YVI9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim30cD3YVI9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim30cD3YVI9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim30cD3YVI9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim30cD3YVI9 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.2■□□□□ 0.66
Trim30cD3YVI9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim30cD3YVI9 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.2■□□□□ 0.66
Trim30cD3YVI9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30cD3YVI9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30cD3YVI9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30cD3YVI9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30cD3YVI9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30cD3YVI9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30cD3YVI9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30cD3YVI9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim30cD3YVI9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30cD3YVI9 Rab3c-203ENSMUST00000224180 967 ntBASIC19.19■□□□□ 0.66
Trim30cD3YVI9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.19■□□□□ 0.66
Trim30cD3YVI9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30cD3YVI9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30cD3YVI9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trim30cD3YVI9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30cD3YVI9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30cD3YVI9 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.19■□□□□ 0.66
Trim30cD3YVI9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30cD3YVI9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30cD3YVI9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30cD3YVI9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30cD3YVI9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim30cD3YVI9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30cD3YVI9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30cD3YVI9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim30cD3YVI9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30cD3YVI9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30cD3YVI9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30cD3YVI9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Trim30cD3YVI9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.18■□□□□ 0.66
Trim30cD3YVI9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.18■□□□□ 0.66
Trim30cD3YVI9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30cD3YVI9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.18■□□□□ 0.66
Trim30cD3YVI9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim30cD3YVI9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30cD3YVI9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30cD3YVI9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30cD3YVI9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30cD3YVI9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim30cD3YVI9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30cD3YVI9 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.17■□□□□ 0.66
Trim30cD3YVI9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30cD3YVI9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30cD3YVI9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30cD3YVI9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trim30cD3YVI9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30cD3YVI9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30cD3YVI9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30cD3YVI9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim30cD3YVI9 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.17■□□□□ 0.66
Trim30cD3YVI9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim30cD3YVI9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30cD3YVI9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30cD3YVI9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30cD3YVI9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30cD3YVI9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30cD3YVI9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30cD3YVI9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30cD3YVI9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30cD3YVI9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms