Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ptchd4B9EKX1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ptchd4B9EKX1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ptchd4B9EKX1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ptchd4B9EKX1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ptchd4B9EKX1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ptchd4B9EKX1 Gm13474-201ENSMUST00000122466 815 ntBASIC18.92■□□□□ 0.62
Ptchd4B9EKX1 Gm6345-202ENSMUST00000180900 204 ntBASIC18.92■□□□□ 0.62
Ptchd4B9EKX1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ptchd4B9EKX1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.92■□□□□ 0.62
Ptchd4B9EKX1 Gm7370-201ENSMUST00000219471 767 ntBASIC18.92■□□□□ 0.62
Ptchd4B9EKX1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ptchd4B9EKX1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Ptchd4B9EKX1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ptchd4B9EKX1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ptchd4B9EKX1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ptchd4B9EKX1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ptchd4B9EKX1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ptchd4B9EKX1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ptchd4B9EKX1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ptchd4B9EKX1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ptchd4B9EKX1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ptchd4B9EKX1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ptchd4B9EKX1 Il3ra-202ENSMUST00000223589 738 ntBASIC18.91■□□□□ 0.62
Ptchd4B9EKX1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.91■□□□□ 0.62
Ptchd4B9EKX1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ptchd4B9EKX1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ptchd4B9EKX1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ptchd4B9EKX1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ptchd4B9EKX1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptchd4B9EKX1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptchd4B9EKX1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ptchd4B9EKX1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ptchd4B9EKX1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ptchd4B9EKX1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ptchd4B9EKX1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptchd4B9EKX1 Gm7367-201ENSMUST00000057611 492 ntBASIC18.9■□□□□ 0.62
Ptchd4B9EKX1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptchd4B9EKX1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptchd4B9EKX1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptchd4B9EKX1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ptchd4B9EKX1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptchd4B9EKX1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptchd4B9EKX1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.89■□□□□ 0.62
Ptchd4B9EKX1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ptchd4B9EKX1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ptchd4B9EKX1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptchd4B9EKX1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.89■□□□□ 0.61
Ptchd4B9EKX1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ptchd4B9EKX1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ptchd4B9EKX1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.89■□□□□ 0.61
Ptchd4B9EKX1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptchd4B9EKX1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptchd4B9EKX1 Gm10819-201ENSMUST00000099988 561 ntBASIC18.89■□□□□ 0.61
Ptchd4B9EKX1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ptchd4B9EKX1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptchd4B9EKX1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptchd4B9EKX1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ptchd4B9EKX1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptchd4B9EKX1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptchd4B9EKX1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Ptchd4B9EKX1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Ptchd4B9EKX1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Idnk-204ENSMUST00000226010 1898 ntBASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptchd4B9EKX1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptchd4B9EKX1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ptchd4B9EKX1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ptchd4B9EKX1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ptchd4B9EKX1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ptchd4B9EKX1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ptchd4B9EKX1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ptchd4B9EKX1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptchd4B9EKX1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptchd4B9EKX1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptchd4B9EKX1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ptchd4B9EKX1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptchd4B9EKX1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ptchd4B9EKX1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptchd4B9EKX1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Ptchd4B9EKX1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ptchd4B9EKX1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptchd4B9EKX1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ptchd4B9EKX1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms