Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rrn3B2RS91 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rrn3B2RS91 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.68■□□□□ 0.42
Rrn3B2RS91 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rrn3B2RS91 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rrn3B2RS91 Gm6576-201ENSMUST00000169678 883 ntBASIC17.68■□□□□ 0.42
Rrn3B2RS91 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.68■□□□□ 0.42
Rrn3B2RS91 Gm18025-201ENSMUST00000221733 862 ntBASIC17.68■□□□□ 0.42
Rrn3B2RS91 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Rrn3B2RS91 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rrn3B2RS91 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rrn3B2RS91 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rrn3B2RS91 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.67■□□□□ 0.42
Rrn3B2RS91 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrn3B2RS91 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rrn3B2RS91 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rrn3B2RS91 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rrn3B2RS91 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rrn3B2RS91 Gm11643-201ENSMUST00000119578 864 ntBASIC17.66■□□□□ 0.42
Rrn3B2RS91 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rrn3B2RS91 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.66■□□□□ 0.42
Rrn3B2RS91 Mir2861-201ENSMUST00000175539 82 ntBASIC17.66■□□□□ 0.42
Rrn3B2RS91 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rrn3B2RS91 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.66■□□□□ 0.42
Rrn3B2RS91 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rrn3B2RS91 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Rrn3B2RS91 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.66■□□□□ 0.42
Rrn3B2RS91 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.65■□□□□ 0.42
Rrn3B2RS91 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rrn3B2RS91 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rrn3B2RS91 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rrn3B2RS91 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.65■□□□□ 0.42
Rrn3B2RS91 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.65■□□□□ 0.42
Rrn3B2RS91 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.65■□□□□ 0.42
Rrn3B2RS91 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Rrn3B2RS91 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rrn3B2RS91 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rrn3B2RS91 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rrn3B2RS91 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rrn3B2RS91 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.65■□□□□ 0.42
Rrn3B2RS91 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rrn3B2RS91 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rrn3B2RS91 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrn3B2RS91 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrn3B2RS91 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrn3B2RS91 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.64■□□□□ 0.41
Rrn3B2RS91 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrn3B2RS91 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.64■□□□□ 0.41
Rrn3B2RS91 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrn3B2RS91 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrn3B2RS91 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rrn3B2RS91 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrn3B2RS91 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrn3B2RS91 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrn3B2RS91 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrn3B2RS91 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.63■□□□□ 0.41
Rrn3B2RS91 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.63■□□□□ 0.41
Rrn3B2RS91 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrn3B2RS91 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrn3B2RS91 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrn3B2RS91 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rrn3B2RS91 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Rrn3B2RS91 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrn3B2RS91 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrn3B2RS91 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrn3B2RS91 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rrn3B2RS91 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rrn3B2RS91 Gm12382-201ENSMUST00000122005 922 ntBASIC17.63■□□□□ 0.41
Rrn3B2RS91 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrn3B2RS91 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.63■□□□□ 0.41
Rrn3B2RS91 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rrn3B2RS91 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrn3B2RS91 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrn3B2RS91 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Rrn3B2RS91 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.63■□□□□ 0.41
Rrn3B2RS91 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rrn3B2RS91 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrn3B2RS91 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rrn3B2RS91 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms