Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a6B1AVK5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Col4a6B1AVK5 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.18■□□□□ 0.5
Col4a6B1AVK5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.18■□□□□ 0.5
Col4a6B1AVK5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Col4a6B1AVK5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a6B1AVK5 Golph3-205ENSMUST00000228671 2842 ntBASIC18.18■□□□□ 0.5
Col4a6B1AVK5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a6B1AVK5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Col4a6B1AVK5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a6B1AVK5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Col4a6B1AVK5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a6B1AVK5 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.18■□□□□ 0.5
Col4a6B1AVK5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a6B1AVK5 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a6B1AVK5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a6B1AVK5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a6B1AVK5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a6B1AVK5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Col4a6B1AVK5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a6B1AVK5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a6B1AVK5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.17■□□□□ 0.5
Col4a6B1AVK5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a6B1AVK5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.17■□□□□ 0.5
Col4a6B1AVK5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a6B1AVK5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Col4a6B1AVK5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a6B1AVK5 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.17■□□□□ 0.5
Col4a6B1AVK5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.17■□□□□ 0.5
Col4a6B1AVK5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.17■□□□□ 0.5
Col4a6B1AVK5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a6B1AVK5 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a6B1AVK5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a6B1AVK5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a6B1AVK5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Col4a6B1AVK5 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a6B1AVK5 Gm15794-201ENSMUST00000120182 631 ntBASIC18.16■□□□□ 0.5
Col4a6B1AVK5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a6B1AVK5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Col4a6B1AVK5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a6B1AVK5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a6B1AVK5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a6B1AVK5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a6B1AVK5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a6B1AVK5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a6B1AVK5 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.15■□□□□ 0.5
Col4a6B1AVK5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a6B1AVK5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a6B1AVK5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.15■□□□□ 0.5
Col4a6B1AVK5 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.15■□□□□ 0.5
Col4a6B1AVK5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Col4a6B1AVK5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a6B1AVK5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a6B1AVK5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Col4a6B1AVK5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a6B1AVK5 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a6B1AVK5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a6B1AVK5 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a6B1AVK5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a6B1AVK5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.14■□□□□ 0.5
Col4a6B1AVK5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Col4a6B1AVK5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col4a6B1AVK5 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
Col4a6B1AVK5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a6B1AVK5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
Col4a6B1AVK5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a6B1AVK5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Col4a6B1AVK5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a6B1AVK5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.13■□□□□ 0.49
Col4a6B1AVK5 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.13■□□□□ 0.49
Col4a6B1AVK5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a6B1AVK5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a6B1AVK5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a6B1AVK5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a6B1AVK5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a6B1AVK5 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a6B1AVK5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a6B1AVK5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a6B1AVK5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a6B1AVK5 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a6B1AVK5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Col4a6B1AVK5 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a6B1AVK5 Gm6623-201ENSMUST00000173570 544 ntBASIC18.12■□□□□ 0.49
Col4a6B1AVK5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a6B1AVK5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a6B1AVK5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a6B1AVK5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a6B1AVK5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a6B1AVK5 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.12■□□□□ 0.49
Col4a6B1AVK5 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a6B1AVK5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a6B1AVK5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a6B1AVK5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a6B1AVK5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a6B1AVK5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a6B1AVK5 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a6B1AVK5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Col4a6B1AVK5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Col4a6B1AVK5 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.11■□□□□ 0.49
Col4a6B1AVK5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms