Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.83■□□□□ 0.6
Sh2d4bA6X942 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.83■□□□□ 0.6
Sh2d4bA6X942 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Sh2d4bA6X942 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Sh2d4bA6X942 Mtag2-201ENSMUST00000058665 714 ntBASIC18.83■□□□□ 0.6
Sh2d4bA6X942 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh2d4bA6X942 Zfp783-201ENSMUST00000095946 670 ntBASIC18.83■□□□□ 0.6
Sh2d4bA6X942 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Gm15375-201ENSMUST00000119510 849 ntBASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Gm3375-201ENSMUST00000203929 796 ntBASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d4bA6X942 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d4bA6X942 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sh2d4bA6X942 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d4bA6X942 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d4bA6X942 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d4bA6X942 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d4bA6X942 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.81■□□□□ 0.6
Sh2d4bA6X942 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d4bA6X942 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d4bA6X942 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d4bA6X942 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d4bA6X942 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d4bA6X942 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d4bA6X942 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d4bA6X942 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d4bA6X942 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d4bA6X942 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d4bA6X942 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d4bA6X942 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.79■□□□□ 0.6
Sh2d4bA6X942 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d4bA6X942 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d4bA6X942 Gm42545-201ENSMUST00000202755 922 ntBASIC18.79■□□□□ 0.6
Sh2d4bA6X942 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d4bA6X942 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.79■□□□□ 0.6
Sh2d4bA6X942 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d4bA6X942 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d4bA6X942 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d4bA6X942 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d4bA6X942 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d4bA6X942 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d4bA6X942 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d4bA6X942 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.78■□□□□ 0.6
Sh2d4bA6X942 Gm23634-201ENSMUST00000175071 91 ntBASIC18.78■□□□□ 0.6
Sh2d4bA6X942 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d4bA6X942 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d4bA6X942 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d4bA6X942 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d4bA6X942 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d4bA6X942 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d4bA6X942 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d4bA6X942 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sh2d4bA6X942 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sh2d4bA6X942 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sh2d4bA6X942 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh2d4bA6X942 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh2d4bA6X942 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sh2d4bA6X942 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh2d4bA6X942 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.77■□□□□ 0.6
Sh2d4bA6X942 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh2d4bA6X942 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms