Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.33□□□□□ -0.12
Chd6A3KFM7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.33□□□□□ -0.12
Chd6A3KFM7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.33□□□□□ -0.12
Chd6A3KFM7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Chd6A3KFM7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.32□□□□□ -0.12
Chd6A3KFM7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd6A3KFM7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd6A3KFM7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Chd6A3KFM7 Gm37722-201ENSMUST00000193757 208 ntBASIC14.32□□□□□ -0.12
Chd6A3KFM7 Gm44357-201ENSMUST00000195897 142 ntBASIC14.32□□□□□ -0.12
Chd6A3KFM7 Gm19658-201ENSMUST00000196231 138 ntBASIC14.32□□□□□ -0.12
Chd6A3KFM7 Gm44367-201ENSMUST00000196836 138 ntBASIC14.32□□□□□ -0.12
Chd6A3KFM7 Gm44350-201ENSMUST00000197197 138 ntBASIC14.32□□□□□ -0.12
Chd6A3KFM7 Gm44390-201ENSMUST00000197533 144 ntBASIC14.32□□□□□ -0.12
Chd6A3KFM7 Gm44313-201ENSMUST00000198018 138 ntBASIC14.32□□□□□ -0.12
Chd6A3KFM7 Gm44486-201ENSMUST00000198508 138 ntBASIC14.32□□□□□ -0.12
Chd6A3KFM7 Gm44454-201ENSMUST00000198541 138 ntBASIC14.32□□□□□ -0.12
Chd6A3KFM7 Gm44314-201ENSMUST00000199263 138 ntBASIC14.32□□□□□ -0.12
Chd6A3KFM7 Gm44394-201ENSMUST00000199558 138 ntBASIC14.32□□□□□ -0.12
Chd6A3KFM7 Gm44484-201ENSMUST00000199873 138 ntBASIC14.32□□□□□ -0.12
Chd6A3KFM7 Gm44466-201ENSMUST00000200264 138 ntBASIC14.32□□□□□ -0.12
Chd6A3KFM7 Gm44359-201ENSMUST00000200671 138 ntBASIC14.32□□□□□ -0.12
Chd6A3KFM7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chd6A3KFM7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd6A3KFM7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chd6A3KFM7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd6A3KFM7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Chd6A3KFM7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd6A3KFM7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chd6A3KFM7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chd6A3KFM7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.32□□□□□ -0.12
Chd6A3KFM7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.32□□□□□ -0.12
Chd6A3KFM7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd6A3KFM7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd6A3KFM7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.31□□□□□ -0.12
Chd6A3KFM7 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.31□□□□□ -0.12
Chd6A3KFM7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.31□□□□□ -0.12
Chd6A3KFM7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.31□□□□□ -0.12
Chd6A3KFM7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.31□□□□□ -0.12
Chd6A3KFM7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Chd6A3KFM7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd6A3KFM7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd6A3KFM7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Chd6A3KFM7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chd6A3KFM7 Gm23547-201ENSMUST00000158210 271 ntBASIC14.31□□□□□ -0.12
Chd6A3KFM7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.31□□□□□ -0.12
Chd6A3KFM7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.31□□□□□ -0.12
Chd6A3KFM7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.31□□□□□ -0.12
Chd6A3KFM7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd6A3KFM7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Chd6A3KFM7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd6A3KFM7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd6A3KFM7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd6A3KFM7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chd6A3KFM7 Mir6956-201ENSMUST00000183598 62 ntBASIC14.3□□□□□ -0.12
Chd6A3KFM7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Chd6A3KFM7 Actl10-202ENSMUST00000226583 1501 ntBASIC14.3□□□□□ -0.12
Chd6A3KFM7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Chd6A3KFM7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd6A3KFM7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd6A3KFM7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd6A3KFM7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd6A3KFM7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd6A3KFM7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.3□□□□□ -0.12
Chd6A3KFM7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.3□□□□□ -0.12
Chd6A3KFM7 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chd6A3KFM7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.3□□□□□ -0.12
Chd6A3KFM7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Chd6A3KFM7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Chd6A3KFM7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd6A3KFM7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd6A3KFM7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd6A3KFM7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chd6A3KFM7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd6A3KFM7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Chd6A3KFM7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd6A3KFM7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.29□□□□□ -0.12
Chd6A3KFM7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.29□□□□□ -0.12
Chd6A3KFM7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd6A3KFM7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Chd6A3KFM7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Chd6A3KFM7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd6A3KFM7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chd6A3KFM7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms