Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a4A2AX52 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a4A2AX52 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a4A2AX52 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Col6a4A2AX52 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a4A2AX52 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Col6a4A2AX52 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col6a4A2AX52 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a4A2AX52 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col6a4A2AX52 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a4A2AX52 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col6a4A2AX52 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Col6a4A2AX52 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a4A2AX52 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a4A2AX52 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Col6a4A2AX52 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a4A2AX52 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a4A2AX52 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a4A2AX52 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a4A2AX52 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a4A2AX52 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.78□□□□□ -0.04
Col6a4A2AX52 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a4A2AX52 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.78□□□□□ -0.04
Col6a4A2AX52 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.78□□□□□ -0.04
Col6a4A2AX52 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.78□□□□□ -0.04
Col6a4A2AX52 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a4A2AX52 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Col6a4A2AX52 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a4A2AX52 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a4A2AX52 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.77□□□□□ -0.04
Col6a4A2AX52 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.77□□□□□ -0.04
Col6a4A2AX52 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.77□□□□□ -0.04
Col6a4A2AX52 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Col6a4A2AX52 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.77□□□□□ -0.04
Col6a4A2AX52 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.77□□□□□ -0.04
Col6a4A2AX52 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.77□□□□□ -0.04
Col6a4A2AX52 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a4A2AX52 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a4A2AX52 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a4A2AX52 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a4A2AX52 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.77□□□□□ -0.05
Col6a4A2AX52 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a4A2AX52 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Col6a4A2AX52 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a4A2AX52 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a4A2AX52 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a4A2AX52 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Col6a4A2AX52 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.76□□□□□ -0.05
Col6a4A2AX52 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.76□□□□□ -0.05
Col6a4A2AX52 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.76□□□□□ -0.05
Col6a4A2AX52 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a4A2AX52 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a4A2AX52 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a4A2AX52 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a4A2AX52 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Col6a4A2AX52 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a4A2AX52 Golph3-202ENSMUST00000226517 2359 ntBASIC14.76□□□□□ -0.05
Col6a4A2AX52 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a4A2AX52 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Col6a4A2AX52 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.76□□□□□ -0.05
Col6a4A2AX52 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a4A2AX52 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a4A2AX52 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Birc2-201ENSMUST00000054878 378 ntBASIC14.75□□□□□ -0.05
Col6a4A2AX52 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a4A2AX52 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.75□□□□□ -0.05
Col6a4A2AX52 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a4A2AX52 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.75□□□□□ -0.05
Col6a4A2AX52 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a4A2AX52 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Gm34391-201ENSMUST00000203706 907 ntBASIC14.75□□□□□ -0.05
Col6a4A2AX52 Gm4974-201ENSMUST00000209974 875 ntBASIC14.75□□□□□ -0.05
Col6a4A2AX52 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.75□□□□□ -0.05
Col6a4A2AX52 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a4A2AX52 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a4A2AX52 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a4A2AX52 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a4A2AX52 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.74□□□□□ -0.05
Col6a4A2AX52 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a4A2AX52 Gm7370-201ENSMUST00000219471 767 ntBASIC14.74□□□□□ -0.05
Col6a4A2AX52 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a4A2AX52 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a4A2AX52 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a4A2AX52 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms