Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 AC107452.1-201ENSMUST00000227963 481 ntBASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv1-88A0A140T8N1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Igkv1-88A0A140T8N1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Igkv1-88A0A140T8N1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Igkv1-88A0A140T8N1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Igkv1-88A0A140T8N1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv1-88A0A140T8N1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv1-88A0A140T8N1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv1-88A0A140T8N1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv1-88A0A140T8N1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv1-88A0A140T8N1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv1-88A0A140T8N1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv1-88A0A140T8N1 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv1-88A0A140T8N1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Igkv1-88A0A140T8N1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv1-88A0A140T8N1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC11.63□□□□□ -0.55
Igkv1-88A0A140T8N1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv1-88A0A140T8N1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv1-88A0A140T8N1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv1-88A0A140T8N1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv1-88A0A140T8N1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms