Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cfap99A0A140LIX9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cfap99A0A140LIX9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cfap99A0A140LIX9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cfap99A0A140LIX9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cfap99A0A140LIX9 Timm23-208ENSMUST00000226683 750 ntBASIC21.04■□□□□ 0.96
Cfap99A0A140LIX9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cfap99A0A140LIX9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cfap99A0A140LIX9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21.04■□□□□ 0.96
Cfap99A0A140LIX9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cfap99A0A140LIX9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cfap99A0A140LIX9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cfap99A0A140LIX9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cfap99A0A140LIX9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfap99A0A140LIX9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.03■□□□□ 0.96
Cfap99A0A140LIX9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.03■□□□□ 0.96
Cfap99A0A140LIX9 Gm37292-201ENSMUST00000192062 758 ntBASIC21.03■□□□□ 0.96
Cfap99A0A140LIX9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.03■□□□□ 0.96
Cfap99A0A140LIX9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfap99A0A140LIX9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cfap99A0A140LIX9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfap99A0A140LIX9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfap99A0A140LIX9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfap99A0A140LIX9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfap99A0A140LIX9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Cfap99A0A140LIX9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.02■□□□□ 0.96
Cfap99A0A140LIX9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfap99A0A140LIX9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Cfap99A0A140LIX9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfap99A0A140LIX9 Rarb-207ENSMUST00000225921 2756 ntBASIC21.02■□□□□ 0.96
Cfap99A0A140LIX9 Gm13559-201ENSMUST00000120476 863 ntBASIC21.02■□□□□ 0.96
Cfap99A0A140LIX9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cfap99A0A140LIX9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.02■□□□□ 0.96
Cfap99A0A140LIX9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cfap99A0A140LIX9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cfap99A0A140LIX9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfap99A0A140LIX9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.02■□□□□ 0.96
Cfap99A0A140LIX9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfap99A0A140LIX9 Fst-202ENSMUST00000223640 2612 ntBASIC21.02■□□□□ 0.96
Cfap99A0A140LIX9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cfap99A0A140LIX9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cfap99A0A140LIX9 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.02■□□□□ 0.95
Cfap99A0A140LIX9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfap99A0A140LIX9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfap99A0A140LIX9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Cfap99A0A140LIX9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfap99A0A140LIX9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfap99A0A140LIX9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfap99A0A140LIX9 Gm7712-202ENSMUST00000222331 1510 ntBASIC21.01■□□□□ 0.95
Cfap99A0A140LIX9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfap99A0A140LIX9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.01■□□□□ 0.95
Cfap99A0A140LIX9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfap99A0A140LIX9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfap99A0A140LIX9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cfap99A0A140LIX9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.01■□□□□ 0.95
Cfap99A0A140LIX9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfap99A0A140LIX9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfap99A0A140LIX9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cfap99A0A140LIX9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cfap99A0A140LIX9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cfap99A0A140LIX9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cfap99A0A140LIX9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21■□□□□ 0.95
Cfap99A0A140LIX9 Gm11539-201ENSMUST00000119837 557 ntBASIC21■□□□□ 0.95
Cfap99A0A140LIX9 Gm13436-201ENSMUST00000120418 567 ntBASIC21■□□□□ 0.95
Cfap99A0A140LIX9 Gm12382-201ENSMUST00000122005 922 ntBASIC21■□□□□ 0.95
Cfap99A0A140LIX9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21■□□□□ 0.95
Cfap99A0A140LIX9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21■□□□□ 0.95
Cfap99A0A140LIX9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cfap99A0A140LIX9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cfap99A0A140LIX9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cfap99A0A140LIX9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Cfap99A0A140LIX9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Cfap99A0A140LIX9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21■□□□□ 0.95
Cfap99A0A140LIX9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cfap99A0A140LIX9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap99A0A140LIX9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap99A0A140LIX9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap99A0A140LIX9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap99A0A140LIX9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cfap99A0A140LIX9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap99A0A140LIX9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cfap99A0A140LIX9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.99■□□□□ 0.95
Cfap99A0A140LIX9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap99A0A140LIX9 Mir6349-201ENSMUST00000184059 97 ntBASIC20.99■□□□□ 0.95
Cfap99A0A140LIX9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap99A0A140LIX9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap99A0A140LIX9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap99A0A140LIX9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap99A0A140LIX9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap99A0A140LIX9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap99A0A140LIX9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap99A0A140LIX9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap99A0A140LIX9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.98■□□□□ 0.95
Cfap99A0A140LIX9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap99A0A140LIX9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap99A0A140LIX9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.98■□□□□ 0.95
Cfap99A0A140LIX9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cfap99A0A140LIX9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap99A0A140LIX9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.98■□□□□ 0.95
Cfap99A0A140LIX9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms