Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc194A0A140LIT1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc194A0A140LIT1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.52■□□□□ 0.4
Ccdc194A0A140LIT1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc194A0A140LIT1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc194A0A140LIT1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc194A0A140LIT1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc194A0A140LIT1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc194A0A140LIT1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 Gm38285-201ENSMUST00000192928 922 ntBASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc194A0A140LIT1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc194A0A140LIT1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc194A0A140LIT1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc194A0A140LIT1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc194A0A140LIT1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc194A0A140LIT1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc194A0A140LIT1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ccdc194A0A140LIT1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc194A0A140LIT1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc194A0A140LIT1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc194A0A140LIT1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc194A0A140LIT1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc194A0A140LIT1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Gm44549-201ENSMUST00000208351 577 ntBASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.49■□□□□ 0.39
Ccdc194A0A140LIT1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Mir5133-201ENSMUST00000174955 77 ntBASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Flg-201ENSMUST00000050758 1488 ntBASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc194A0A140LIT1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc194A0A140LIT1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc194A0A140LIT1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc194A0A140LIT1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc194A0A140LIT1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc194A0A140LIT1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc194A0A140LIT1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.47■□□□□ 0.39
Ccdc194A0A140LIT1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms