Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26524-201ENSMUST00000192339 390 ntBASIC15.44■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab3c-203ENSMUST00000224180 967 ntBASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Mir2861-201ENSMUST00000175539 82 ntBASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm8495-201ENSMUST00000188740 694 ntBASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms