Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav19A0A0B4J1K4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav19A0A0B4J1K4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trav19A0A0B4J1K4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav19A0A0B4J1K4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav19A0A0B4J1K4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav19A0A0B4J1K4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav19A0A0B4J1K4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav19A0A0B4J1K4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav19A0A0B4J1K4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav19A0A0B4J1K4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav19A0A0B4J1K4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav19A0A0B4J1K4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav19A0A0B4J1K4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.15□□□□□ -0.3
Trav19A0A0B4J1K4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav19A0A0B4J1K4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav19A0A0B4J1K4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav19A0A0B4J1K4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav19A0A0B4J1K4 Gm13234-201ENSMUST00000120010 747 ntBASIC13.15□□□□□ -0.3
Trav19A0A0B4J1K4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav19A0A0B4J1K4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav19A0A0B4J1K4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav19A0A0B4J1K4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav19A0A0B4J1K4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav19A0A0B4J1K4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav19A0A0B4J1K4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav19A0A0B4J1K4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav19A0A0B4J1K4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav19A0A0B4J1K4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav19A0A0B4J1K4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trav19A0A0B4J1K4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.15□□□□□ -0.31
Trav19A0A0B4J1K4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.15□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms