Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4-3A0A0B4J1K1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4-3A0A0B4J1K1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav4-3A0A0B4J1K1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav4-3A0A0B4J1K1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4-3A0A0B4J1K1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav4-3A0A0B4J1K1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav4-3A0A0B4J1K1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4-3A0A0B4J1K1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4-3A0A0B4J1K1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4-3A0A0B4J1K1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4-3A0A0B4J1K1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.02□□□□□ -0.49
Trav4-3A0A0B4J1K1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4-3A0A0B4J1K1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gm27801-201ENSMUST00000184174 223 ntBASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4-3A0A0B4J1K1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gm42501-201ENSMUST00000200220 1026 ntBASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav4-3A0A0B4J1K1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gm22238-201ENSMUST00000175222 88 ntBASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gm7160-202ENSMUST00000188519 1027 ntBASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gm5576-201ENSMUST00000075809 1236 ntBASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4-3A0A0B4J1K1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms