Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 CT010467.1-202ENSMUST00000205406 714 ntBASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Gm6139-201ENSMUST00000079261 882 ntBASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav11A0A0B4J1J9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav11A0A0B4J1J9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Gm27454-201ENSMUST00000185090 204 ntBASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav11A0A0B4J1J9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav11A0A0B4J1J9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav11A0A0B4J1J9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav11A0A0B4J1J9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms