Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.52■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.52■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.52■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.52■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv12-1A0A0B4J1H0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv12-1A0A0B4J1H0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.52■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Gm715-201ENSMUST00000117865 831 ntBASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.51■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.5■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.5■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.5■□□□□ 0.07
Trbv12-1A0A0B4J1H0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.5■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.5■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.5■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.5■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.5■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Odf3b-204ENSMUST00000227834 930 ntBASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.48■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.48■□□□□ 0.07
Trbv12-1A0A0B4J1H0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv12-1A0A0B4J1H0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.48■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.48■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.48■□□□□ 0.07
Trbv12-1A0A0B4J1H0 Timm23-208ENSMUST00000226683 750 ntBASIC15.48■□□□□ 0.07
Trbv12-1A0A0B4J1H0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms