Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.71■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.7■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.7■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.7■□□□□ 0.26
Sirpb1aA0A0A6YYP6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.69■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.69■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.69■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.69■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.69■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.68■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.68■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.67■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.67■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Gm5874-201ENSMUST00000096101 508 ntBASIC16.67■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.67■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms