Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-42A0A0A6YY38 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-42A0A0A6YY38 Fst-202ENSMUST00000223640 2612 ntBASIC16.26■□□□□ 0.19
Ighv1-42A0A0A6YY38 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ighv1-42A0A0A6YY38 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-42A0A0A6YY38 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Gm13474-201ENSMUST00000122466 815 ntBASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-42A0A0A6YY38 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-42A0A0A6YY38 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Ighv1-42A0A0A6YY38 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-42A0A0A6YY38 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-42A0A0A6YY38 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-42A0A0A6YY38 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-42A0A0A6YY38 Gm23634-201ENSMUST00000175071 91 ntBASIC16.24■□□□□ 0.19
Ighv1-42A0A0A6YY38 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Ighv1-42A0A0A6YY38 Gm9731-201ENSMUST00000209480 747 ntBASIC16.24■□□□□ 0.19
Ighv1-42A0A0A6YY38 Gm18101-201ENSMUST00000215769 548 ntBASIC16.24■□□□□ 0.19
Ighv1-42A0A0A6YY38 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-42A0A0A6YY38 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-42A0A0A6YY38 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ighv1-42A0A0A6YY38 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-42A0A0A6YY38 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-42A0A0A6YY38 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-42A0A0A6YY38 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-42A0A0A6YY38 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ighv1-42A0A0A6YY38 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-42A0A0A6YY38 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Ighv1-42A0A0A6YY38 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-42A0A0A6YY38 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-42A0A0A6YY38 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-42A0A0A6YY38 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ighv1-42A0A0A6YY38 Gm22697-201ENSMUST00000175194 63 ntBASIC16.22■□□□□ 0.19
Ighv1-42A0A0A6YY38 Il3ra-202ENSMUST00000223589 738 ntBASIC16.22■□□□□ 0.19
Ighv1-42A0A0A6YY38 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-42A0A0A6YY38 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Ighv1-42A0A0A6YY38 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-42A0A0A6YY38 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.22■□□□□ 0.19
Ighv1-42A0A0A6YY38 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-42A0A0A6YY38 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-42A0A0A6YY38 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-42A0A0A6YY38 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-42A0A0A6YY38 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ighv1-42A0A0A6YY38 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-42A0A0A6YY38 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-42A0A0A6YY38 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-42A0A0A6YY38 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-42A0A0A6YY38 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ighv1-42A0A0A6YY38 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-42A0A0A6YY38 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ighv1-42A0A0A6YY38 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-42A0A0A6YY38 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ighv1-42A0A0A6YY38 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Ighv1-42A0A0A6YY38 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ighv1-42A0A0A6YY38 Idnk-204ENSMUST00000226010 1898 ntBASIC16.2■□□□□ 0.18
Ighv1-42A0A0A6YY38 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-42A0A0A6YY38 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-42A0A0A6YY38 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-42A0A0A6YY38 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-42A0A0A6YY38 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.2■□□□□ 0.18
Ighv1-42A0A0A6YY38 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.2■□□□□ 0.18
Ighv1-42A0A0A6YY38 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms