Protein–RNA interactions for Protein: A0A0A6YWX2

Ighv1-49, Immunoglobulin heavy variable 1-49 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-49A0A0A6YWX2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Gm42569-201ENSMUST00000200539 472 ntBASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.52□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ighv1-49A0A0A6YWX2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ighv1-49A0A0A6YWX2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ighv1-49A0A0A6YWX2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ighv1-49A0A0A6YWX2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ighv1-49A0A0A6YWX2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms