Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Gm27405-201ENSMUST00000184201 112 ntBASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Mir5133-201ENSMUST00000174955 77 ntBASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav21-dv12A0A075B6C4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav21-dv12A0A075B6C4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.52□□□□□ -0.24
Trav21-dv12A0A075B6C4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.52□□□□□ -0.24
Trav21-dv12A0A075B6C4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav21-dv12A0A075B6C4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav21-dv12A0A075B6C4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav21-dv12A0A075B6C4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
Trav21-dv12A0A075B6C4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Trav21-dv12A0A075B6C4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Gm2399-201ENSMUST00000104944 225 ntBASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trav21-dv12A0A075B6C4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav21-dv12A0A075B6C4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms