Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-3A0A075B6A4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-3A0A075B6A4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-3A0A075B6A4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-3A0A075B6A4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-3A0A075B6A4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Trav12d-3A0A075B6A4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-3A0A075B6A4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav12d-3A0A075B6A4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-3A0A075B6A4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-3A0A075B6A4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-3A0A075B6A4 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.15□□□□□ -0.3
Trav12d-3A0A075B6A4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.15□□□□□ -0.3
Trav12d-3A0A075B6A4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Trav12d-3A0A075B6A4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-3A0A075B6A4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Trav12d-3A0A075B6A4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-3A0A075B6A4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Trav12d-3A0A075B6A4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms