Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.63□□□□□ -0.23
Trav16A0A075B653 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16A0A075B653 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Trav16A0A075B653 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Trav16A0A075B653 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16A0A075B653 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
Trav16A0A075B653 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.6□□□□□ -0.23
Trav16A0A075B653 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16A0A075B653 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Dancr-204ENSMUST00000132389 2347 ntBASIC13.59□□□□□ -0.23
Trav16A0A075B653 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms