Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Gm27405-201ENSMUST00000184201 112 ntBASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Gm15039-201ENSMUST00000118914 875 ntBASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Trav5-4A0A075B652 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-4A0A075B652 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Mir5133-201ENSMUST00000174955 77 ntBASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms